RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SERPINB9P50453 376 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 COPAP53621 1224 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 PDE1BQ01064 536 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 CNTN2Q02246 1040 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 KDSRQ06136 332 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 TUBB3Q13509 450 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 SATL1Q86VE3 508 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 WDR75Q8IWA0 830 aaKnown RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 RDM1Q8NG50 284 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 KLF6Q99612 283 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 ALG13Q9NP73 1137 aaKnown RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 DNAJC28Q9NX36 388 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 AGTPBP1Q9UPW5 1226 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 CCL15-CCL14A0A0B4J2E2 113 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 PRR5-ARHGAP8B1AHC4 643 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 EXTL3O43909 919 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 BANF1O75531 89 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 TNFAIP8O95379 198 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 HLA-DRAP01903 254 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 C4BPAP04003 597 aaKnown RBP11.03□□□□□ -0.64
CAPN3-205ENST00000357568 CAPNS1P04632 268 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 CD48P09326 243 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 GJC1P36383 396 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 MAGEA6P43360 314 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 AQP4P55087 323 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 SNAP25P60880 206 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 PSMC5P62195 406 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 ARHGAP8P85298 464 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 OTUD4Q01804 1114 aaKnown RBP11.03□□□□□ -0.64
CAPN3-205ENST00000357568 CCL15Q16663 113 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 KBTBD12Q3ZCT8 623 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 LLGL2Q6P1M3 1020 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 DNAJC24Q6P3W2 148 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 SLC39A4Q6P5W5 647 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 KBTBD6Q86V97 674 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 NUDCD3Q8IVD9 361 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 UBR7Q8N806 425 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 GSTCDQ8NEC7 633 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 ACTL9Q8TC94 416 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 TRPC4APQ8TEL6 797 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 CMTM5Q96DZ9 223 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 CLPTM1LQ96KA5 538 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 C12orf65Q9H3J6 166 aaKnown RBP11.03□□□□□ -0.64
CAPN3-205ENST00000357568 USP29Q9HBJ7 922 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 ADAMTS6Q9UKP5 1117 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 PARP14Q460N5 1801 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 TRIM49D1C9J1S8 452 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 KRT38O76015 456 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 CLPTM1O96005 669 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 TFAP2AP05549 437 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 WEE2P0C1S8 567 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 ELK3P41970 407 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 NPTX2P47972 431 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 HSD17B4P51659 736 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 JAK3P52333 1124 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 HMGCS2P54868 508 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 INHBCP55103 352 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 FOLH1Q04609 750 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 STX3Q13277 289 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 DCTN2Q13561 401 aaKnown RBP11.03□□□□□ -0.64
CAPN3-205ENST00000357568 APOFQ13790 326 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 KCNJ11Q14654 390 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 CHI3L2Q15782 390 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 ATP13A4Q4VNC1 1196 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 RNF111Q6ZNA4 994 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 NUP93Q8N1F7 819 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 ACMSDQ8TDX5 336 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 GTF3C2Q8WUA4 911 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-205ENST00000357568 KCNK16Q96T55 309 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 BCAP29Q9UHQ4 241 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 PSMD13Q9UNM6 376 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 DTNAQ9Y4J8 743 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 TTLL3Q9Y4R7 772 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 TELO2Q9Y4R8 837 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 PCDHGA4Q9Y5G9 962 aa11.03□□□□□ -0.64
CAPN3-205ENST00000357568 C2orf71A6NGG8 1288 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 GOLGA8SH3BPF8 625 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 GOLGA8MH3BSY2 632 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 APOC4-APOC2K7ER74 178 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 PFDN1O60925 122 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 APOC2P02655 101 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 SPATA31D3P0C874 917 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 CCDC130P13994 396 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 ETS2P15036 469 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 OSBPP22059 807 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 SFNP31947 248 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 VEGFBP49765 207 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 MRPS5P82675 430 aaKnown RBP11.02□□□□□ -0.64
CAPN3-205ENST00000357568 DLG1Q12959 904 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 ZFP1Q6P2D0 407 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 C4orf22Q6V702 233 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 GADL1Q6ZQY3 521 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 SPATA31D4Q6ZUB0 917 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 CYS1Q717R9 158 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 TMC7Q7Z402 723 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 CHURC1Q8WUH1 139 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms