RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TTLL2Q9BWV7 592 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 ENTPD7Q9NQZ7 604 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 DDX56Q9NY93 547 aaKnown RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 NR2E1Q9Y466 385 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 MYO7AQ13402 2215 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 MTCL1Q9Y4B5 1905 aaKnown RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 TNRC18O15417 2968 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 TARSL2A2RTX5 802 aaKnown RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 C2orf71A6NGG8 1288 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 TGM5O43548 720 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 SPATA31D3P0C874 917 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 DESP17661 470 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 UBE3AQ05086 875 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 TAF10Q12962 218 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 GLE1Q53GS7 698 aaKnown RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 PLPP4Q5VZY2 271 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 CCDC70Q6NSX1 233 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 LILRA6Q6PI73 481 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 MFSD7Q6UXD7 560 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 SPATA31D4Q6ZUB0 917 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 SLC13A5Q86YT5 568 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 RCOR2Q8IZ40 523 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 MRPL43Q8N983 215 aaKnown RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 FBXO32Q969P5 355 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 TGS1Q96RS0 853 aaKnown RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 NCAPGQ9BPX3 1015 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 AP1M1Q9BXS5 423 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 TLR9Q9NR96 1032 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 ABCC13Q9NSE7 274 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 PIGVQ9NUD9 493 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 COMMD8Q9NX08 183 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 LRRD1A4D1F6 860 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 FSCN2O14926 492 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 HMGA1P17096 107 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 RDXP35241 583 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 ARSEP51690 589 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 ERVK-21P61565 698 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 BTBD8Q5XKL5 378 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 ADAT2Q7Z6V5 191 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 TAC4Q86UU9 113 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 CCDC50Q8IVM0 306 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 CCDC185Q8N715 623 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 DQX1Q8TE96 717 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 HSPH1Q92598 858 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 PGAP3Q96FM1 320 aaPredicted RBP18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 RBM41Q96IZ5 413 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 SNRNP25Q9BV90 132 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 TRIM62Q9BVG3 475 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 PBX4Q9BYU1 374 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 EPC1Q9H2F5 836 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 WDR6Q9NNW5 1121 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 GPATCH2LQ9NWQ4 482 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 RRN3Q9NYV6 651 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 MAFFQ9ULX9 164 aa18.91■□□□□ 0.62
SMARCD3-202ENST00000356800 SYNJ2BP-COX16A0A087WUM0 186 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 PRRG1O14668 218 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 IGLV3-25P01717 112 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 CD48P09326 243 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 RHOXF2BP0C7M4 288 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 RALAP11233 206 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 KDELR1P24390 212 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 IRS1P35568 1242 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 DEUP1Q05D60 604 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 NME3Q13232 169 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 SMC1AQ14683 1233 aaKnown RBP18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 PPP2R5EQ16537 467 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 CA9Q16790 459 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 BOLA3Q53S33 107 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 ZFYVE27Q5T4F4 411 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 SPOCD1Q6ZMY3 1216 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 FAM131BQ86XD5 332 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 TEKT4Q8WW24 435 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 RHOXF2Q9BQY4 288 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 PARD6BQ9BYG5 372 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 COX16Q9P0S2 106 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 NUDT5Q9UKK9 219 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 RAB21Q9UL25 225 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 MAGED2Q9UNF1 606 aaPredicted RBP18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 INSL5Q9Y5Q6 135 aa18.9■□□□□ 0.62
SMARCD3-202ENST00000356800 GOLGA6L10A0A0M3HER8 536 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 ADH1AP07327 375 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 ZDHHC11BP0C7U3 371 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 ELF1P32519 619 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 CDKN2BP42772 138 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 ALDH1A3P47895 512 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 TWF1Q12792 350 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 EIF4EBP2Q13542 120 aaPredicted RBP18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 SIX1Q15475 284 aaPredicted RBP18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 TAZQ16635 292 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 ZC3H12AQ5D1E8 599 aaKnown RBP18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 SAMD11Q96NU1 681 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 HEMGNQ9BXL5 484 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 MAGEB5Q9BZ81 275 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 OSBPL8Q9BZF1 889 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 DDIT4Q9NX09 232 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 ANAPC1Q9H1A4 1944 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 MDM4O15151 490 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 KRT10P13645 584 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 H2AFXP16104 143 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms