RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 APOEP02649 317 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 GSTA2P09210 222 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 DESP17661 470 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 KRT72Q14CN4 511 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 OR52E8Q6IFG1 317 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 UNC5AQ6ZN44 842 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 MFN1Q8IWA4 741 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 DEFB107AQ8IZN7 70 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 GALNT15Q8N3T1 639 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 RNF148Q8N7C7 305 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 C12orf29Q8N999 325 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.83□□□□□ -0.23e-8■□□□□ 10.1
NCDN-201ENST00000356090 FAM136AQ96C01 138 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 SMYD2Q9NRG4 433 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 WDR35Q9P2L0 1181 aa13.83□□□□□ -0.2
NCDN-201ENST00000356090 SMAPO00193 183 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 ITM2AO43736 263 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 TM7SF2O76062 418 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 TCF7P36402 384 aaPredicted RBP13.82□□□□□ -0.2
NCDN-201ENST00000356090 RANBP1P43487 201 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 CDC16Q13042 620 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 NCAPG2Q86XI2 1143 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 CENPKQ9BS16 269 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 ETAA1Q9NY74 926 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 PDP2Q9P2J9 529 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 HBS1LQ9Y450 684 aaKnown RBP13.82□□□□□ -0.2
NCDN-201ENST00000356090 GOLGA8QA0A0J9YX86 632 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 GOLGA8OA6NCC3 632 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 GOLGA8NF8WBI6 632 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 TGDSO95455 350 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 NFICP08651 508 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 TYK2P29597 1187 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 RAB27AP51159 221 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 CLCN3P51790 818 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 COPAP53621 1224 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 RTP1P59025 263 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 EFHC1Q5JVL4 640 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 NXNQ6DKJ4 435 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 SCUBE3Q8IX30 993 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 NME8Q8N427 588 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 FAM172AQ8WUF8 416 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 TEX13BQ9BXU2 312 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 MYOZ2Q9NPC6 264 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 ETNK2Q9NVF9 386 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 PNPOQ9NVS9 261 aa13.82□□□□□ -0.2
NCDN-201ENST00000356090 WDR27A2RRH5 827 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 A6NJR5 290 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 AIM2O14862 343 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 DCXO43602 365 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 TRPA1O75762 1119 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 SDC4P31431 198 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 ASPAP45381 313 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 GTF2A2P52657 109 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 ZNF132P52740 706 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 CLDN10P78369 228 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 MRPS5P82675 430 aaKnown RBP13.81□□□□□ -0.2
NCDN-201ENST00000356090 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 TMEM132BQ14DG7 1078 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 NOMO1Q15155 1222 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 EML3Q32P44 896 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 AGAP3Q96P47 875 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 PGLYRP2Q96PD5 576 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 MAGEB5Q9BZ81 275 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
NCDN-201ENST00000356090 PDLIM7Q9NR12 457 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 TTLL3Q9Y4R7 772 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 E7ESA3 106 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 SPAG6O75602 509 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 ATP6V1B1P15313 513 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 SLC18A2Q05940 514 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 CXCL9Q07325 125 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 ATF7IP2Q5U623 682 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 FOXB2Q5VYV0 432 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 NET1Q7Z628 596 aaPredicted RBP13.81□□□□□ -0.2
NCDN-201ENST00000356090 GCNAQ96QF7 691 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 DHRS4Q9BTZ2 278 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 RNPEPQ9H4A4 650 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 DNAJC6O75061 913 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 ABCD1P33897 745 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 SLC1A6P48664 564 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 BTKQ06187 659 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 AMHR2Q16671 573 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 CA9Q16790 459 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 LY6KQ17RY6 165 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 PPM1JQ5JR12 505 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 HPS6Q86YV9 775 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 RNF157Q96PX1 679 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 IRAK4Q9NWZ3 460 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 CLIC5Q9NZA1 410 aa13.81□□□□□ -0.2
NCDN-201ENST00000356090 PEX2P28328 305 aa13.8□□□□□ -0.2
NCDN-201ENST00000356090 GBE1Q04446 702 aa13.8□□□□□ -0.2
NCDN-201ENST00000356090 ITGA9Q13797 1035 aa13.8□□□□□ -0.2
NCDN-201ENST00000356090 HEATR6Q6AI08 1181 aaKnown RBP13.8□□□□□ -0.2
NCDN-201ENST00000356090 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
NCDN-201ENST00000356090 PLD5Q8N7P1 536 aa13.8□□□□□ -0.2
NCDN-201ENST00000356090 GDPD5Q8WTR4 605 aa13.8□□□□□ -0.2
NCDN-201ENST00000356090 FAM149B1Q96BN6 582 aa13.8□□□□□ -0.2
NCDN-201ENST00000356090 CNPY3Q9BT09 278 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms