RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 PDPK2PQ6A1A2 396 aa14.09□□□□□ -0.15
TRIM4-203ENST00000355947 CMC1Q7Z7K0 106 aa14.09□□□□□ -0.15
TRIM4-203ENST00000355947 TRIM74Q86UV6 250 aa14.09□□□□□ -0.15
TRIM4-203ENST00000355947 TRIM73Q86UV7 250 aa14.09□□□□□ -0.15
TRIM4-203ENST00000355947 ARHGAP18Q8N392 663 aa14.09□□□□□ -0.15
TRIM4-203ENST00000355947 ZNF276Q8N554 614 aa14.09□□□□□ -0.15
TRIM4-203ENST00000355947 NKD2Q969F2 451 aaPredicted RBP14.09□□□□□ -0.15
TRIM4-203ENST00000355947 CYP26B1Q9NR63 512 aa14.09□□□□□ -0.15
TRIM4-203ENST00000355947 DRG1Q9Y295 367 aaKnown RBP14.09□□□□□ -0.15
TRIM4-203ENST00000355947 COL14A1Q05707 1796 aaKnown RBP14.08□□□□□ -0.15
TRIM4-203ENST00000355947 SEC24DO94855 1032 aaPredicted RBP14.08□□□□□ -0.15
TRIM4-203ENST00000355947 NR3C2P08235 984 aa14.08□□□□□ -0.15
TRIM4-203ENST00000355947 SLC1A6P48664 564 aa14.08□□□□□ -0.15
TRIM4-203ENST00000355947 TAS1R3Q7RTX0 852 aa14.08□□□□□ -0.15
TRIM4-203ENST00000355947 TTC13Q8NBP0 860 aa14.08□□□□□ -0.15
TRIM4-203ENST00000355947 CCNYQ8ND76 341 aa14.08□□□□□ -0.15
TRIM4-203ENST00000355947 PDCD2LQ9BRP1 358 aa14.08□□□□□ -0.15
TRIM4-203ENST00000355947 FAM192AQ9GZU8 254 aa14.08□□□□□ -0.15
TRIM4-203ENST00000355947 USP12O75317 370 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 AMHP03971 560 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 ETV4P43268 484 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 JAK3P52333 1124 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 MAPK10P53779 464 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 INHBCP55103 352 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 YWHAZP63104 245 aaKnown RBP14.08□□□□□ -0.16
TRIM4-203ENST00000355947 KRT76Q01546 638 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 KRT72Q14CN4 511 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 SPDYAQ5MJ70 313 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 DACT2Q5SW24 774 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 TRIML2Q8N7C3 387 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 C7orf31Q8N865 590 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 SNX31Q8N9S9 440 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 NR1H4Q96RI1 486 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-203ENST00000355947 OXCT2Q9BYC2 517 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-203ENST00000355947 HAPLN2Q9GZV7 340 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 KLC2Q9H0B6 622 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-203ENST00000355947 RNF146Q9NTX7 359 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 USP21Q9UK80 565 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-203ENST00000355947 ANKRD12Q6UB98 2062 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 TBXAS1P24557 533 aaPredicted RBP14.08□□□□□ -0.16
TRIM4-203ENST00000355947 CAP2P40123 477 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 IGBP1P78318 339 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 MRPS5P82675 430 aaKnown RBP14.08□□□□□ -0.16
TRIM4-203ENST00000355947 KCTD21Q4G0X4 260 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 TMCO4Q5TGY1 634 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 LAYNQ6UX15 382 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 TRIM42Q8IWZ5 723 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 WNK4Q96J92 1243 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 DCUN1D5Q9BTE7 237 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 RIPK3Q9Y572 518 aa14.08□□□□□ -0.16
TRIM4-203ENST00000355947 WDR27A2RRH5 827 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 FOXD2O60548 495 aaPredicted RBP14.07□□□□□ -0.16
TRIM4-203ENST00000355947 MT-CO1P00395 513 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 UQCRBP14927 111 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 CD1EP15812 388 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 ADORA2AP29274 412 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 GLRBP48167 497 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 HSF5Q4G112 596 aaPredicted RBP14.07□□□□□ -0.16
TRIM4-203ENST00000355947 MCF2L2Q86YR7 1114 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 C10orf107Q8IVU9 208 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 MCPH1Q8NEM0 835 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 ATP2A3Q93084 1043 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 A0A088AWK7 358 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 STX16-NPEPL1H3BU86 382 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 SIN3BO75182 1162 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 DGAT1O75907 488 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 SRGAP2BP0DMP2 458 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 FSTL1Q12841 308 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 OLIG2Q13516 323 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 WDR78Q5VTH9 848 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 FRMD7Q6ZUT3 714 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 RELL1Q8IUW5 271 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 DCLK2Q8N568 766 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 ZFAND2BQ8WV99 257 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 CNKSR2Q8WXI2 1034 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 PPWD1Q96BP3 646 aaKnown RBP14.07□□□□□ -0.16
TRIM4-203ENST00000355947 ATG4CQ96DT6 458 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 CAAP1Q9H8G2 361 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 ADA2Q9NZK5 511 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 LZTS1Q9Y250 596 aa14.07□□□□□ -0.16
TRIM4-203ENST00000355947 TPP1O14773 563 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 MLH1P40692 756 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 ACTR2P61160 394 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 PTP4A2Q12974 167 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 GSTA3Q16772 222 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 PPM1LQ5SGD2 360 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 UNC5AQ6ZN44 842 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 BBS12Q6ZW61 710 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 AMIGO2Q86SJ2 522 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 FAM160B2Q86V87 743 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 MYLK4Q86YV6 388 aaPredicted RBP14.06□□□□□ -0.16
TRIM4-203ENST00000355947 APOL2Q9BQE5 337 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 TNRC6CQ9HCJ0 1690 aaKnown RBP14.06□□□□□ -0.16
TRIM4-203ENST00000355947 JPH1Q9HDC5 661 aaPredicted RBP14.06□□□□□ -0.16
TRIM4-203ENST00000355947 HMGXB4Q9UGU5 601 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 FEM1BQ9UK73 627 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 POMPQ9Y244 141 aa14.06□□□□□ -0.16
TRIM4-203ENST00000355947 MAGEC1O60732 1142 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms