RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 CYP2C8P10632 490 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ITGA1P56199 1179 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 R3HDM1Q15032 1099 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 CYP2A13Q16696 494 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 RNPC3Q96LT9 517 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 MTO1Q9Y2Z2 717 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 E2F8A0AVK6 867 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ATP6AP1LQ52LC2 224 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TRMT2AQ8IZ69 625 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 NEK7Q8TDX7 302 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 A0A0G2JLW4 131 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 MCIDASD6RGH6 385 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 IFNA16P05015 189 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TMED10P49755 219 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 BTG3Q14201 252 aaPredicted RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 NFRKBQ6P4R8 1299 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 UXS1Q8NBZ7 420 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 BSNDQ8WZ55 320 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 STARD8Q92502 1023 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PDXKO00764 312 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 F9P00740 461 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 CSF1RP07333 972 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 LYNP07948 512 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TRIM25Q14258 630 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ELL3Q9HB65 397 aaPredicted RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 KLC4Q9NSK0 619 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PITPNM2Q9BZ72 1349 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 GMNCA6NCL1 334 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 CNOT3O75175 753 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 MFN2O95140 757 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 POLR2LP62875 67 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 EXOSC10Q01780 885 aaKnown RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 MAD2L1Q13257 205 aaPredicted RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 MIR1-1HGQ9H1L0 117 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 GBA2Q9HCG7 927 aaPredicted RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TUBE1Q9UJT0 475 aa8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ARIH1Q9Y4X5 557 aaPredicted RBP8.69□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TCP11X1B4DZS4 312 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PHF2O75151 1096 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 B3GAT3O94766 335 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TCN1P20061 433 aaPredicted RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 EPHB2P29323 1055 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ERFP50548 548 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PRPF39Q86UA1 669 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 STAG2Q8N3U4 1231 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 MAGED4Q96JG8 741 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 FBXO44Q9H4M3 255 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PIH1D3Q9NQM4 214 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 SPATA2Q9UM82 520 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TEX33O43247 280 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 IGSF6O95976 241 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 COX7A2P14406 83 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PTGES3Q15185 160 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TLK2Q86UE8 772 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 C3orf20Q8ND61 904 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 OR52L1Q8NGH7 329 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ZNF669Q96BR6 464 aaPredicted RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 MYOZ2Q9NPC6 264 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ABI3Q9P2A4 366 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TRIM64A6NGJ6 449 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 KRT6AP02538 564 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 KRT6BP04259 564 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 FCGR1AP12314 374 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PIK3R1P27986 724 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 HTR1BP28222 390 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 KRT6CP48668 564 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 LHX1P48742 406 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ZNF484Q5JVG2 852 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ATP6V1G3Q96LB4 118 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PRMT1Q99873 361 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 DNAJC11Q9NVH1 559 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 MINPP1Q9UNW1 487 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 CPSF1Q10570 1443 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TULP4Q9NRJ4 1543 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 LOC102724159A0A0B4J2E5 919 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 CPSF4O95639 269 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 GRIK3Q13003 919 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PWP2Q15269 919 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ATP13A4Q4VNC1 1196 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PROX1Q92786 737 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 SPATA9Q9BWV2 254 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PIK3C2BO00750 1634 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 STX11O75558 287 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 STAT5AP42229 794 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 RBBP4Q09028 425 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 DDR2Q16832 855 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 PROSER3Q2NL68 480 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 TYW3Q6IPR3 259 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 SLC39A8Q9C0K1 460 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 DGKIO75912 1065 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 SNRPAP09012 282 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 ZNF23P17027 643 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 SUSD6Q92537 303 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 HMG20AQ9NP66 347 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 HPS5Q9UPZ3 1129 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 RBM7Q9Y580 266 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 NFE2Q16621 373 aaPredicted RBP8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 CYP4X1Q8N118 509 aa8.68□□□□□ -1.02
SH3PXD2A-202ENST00000355946 GALNT4Q8N4A0 578 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms