RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RBM22Q9NW64 420 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 SMPD4Q9NXE4 827 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 LNPEPQ9UIQ6 1025 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 FZD1Q9UP38 647 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 PTPRMP28827 1452 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 UBXN8O00124 270 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 NR5A2O00482 541 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 MAPK1P28482 360 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 SHMT1P34896 483 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 ADIGQ0VDE8 80 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 NFYCQ13952 458 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 POU6F1Q14863 301 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 NFIL3Q16649 462 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 KAZALD1Q96I82 304 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 FAR2Q96K12 515 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 PPP2R3BQ9Y5P8 575 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 MGAT4DA6NG13 374 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 ERI2A8K979 691 aaKnown RBP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 GRK3P35626 688 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 ERMARDQ5T6L9 678 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 TTC33Q6PID6 262 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 NLRP9Q7RTR0 991 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 EXD1Q8NHP7 514 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 MAGED4Q96JG8 741 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 TMEM245Q9H330 911 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 CDC42EP4Q9H3Q1 356 aaKnown RBP13.6□□□□□ -0.23
SCN8A-202ENST00000355133 GPRC5DQ9NZD1 345 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 PCDHB5Q9Y5E4 795 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 CAMSAP1Q5T5Y3 1602 aa13.6□□□□□ -0.23
SCN8A-202ENST00000355133 ADM5C9JUS6 153 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 GOLGA8TH3BQL2 631 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 STAU1O95793 577 aaKnown RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 IL1R1P14778 569 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ZNF23P17027 643 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 RPS7P62081 194 aaKnown RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 MFSD10Q14728 455 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 FAM171A1Q5VUB5 890 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 HAO1Q9UJM8 370 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 STRNO43815 780 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 KPNA6O60684 536 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 HNRNPCP07910 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ERVK-10P10266 1014 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ANGPT1Q15389 498 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 NFE2Q16621 373 aaPredicted RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ALFQ53S48 1182 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ITIH5Q86UX2 942 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 VANGL2Q9ULK5 521 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 BARX2Q9UMQ3 279 aaPredicted RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 GTF2A1LQ9UNN4 478 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 CAB39Q9Y376 341 aaPredicted RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 FGFR1P11362 822 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 KLRC2P26717 231 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 PKN1Q16512 942 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 SEL1L3Q68CR1 1132 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 RD3Q7Z3Z2 195 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ABRAQ8N0Z2 381 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ACOX2Q99424 681 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 PIH1D1Q9NWS0 290 aaKnown RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ZSCAN32Q9NX65 697 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 PADI4Q9UM07 663 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 E9PCH4 1651 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 THRAP10827 490 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ATP6V1B1P15313 513 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 CCR1P32246 355 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 AQP5P55064 265 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 TBX4P57082 545 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 MPP3Q13368 585 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 TEX9Q8N6V9 391 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 PIF1Q9H611 641 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ACOT9Q9Y305 439 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 E9PBE3 544 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 TRIM66O15016 1216 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 KLHL41O60662 606 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 VIL1P09327 827 aaKnown RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ADORA2AP29274 412 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ANKS6Q68DC2 871 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ARHGEF19Q8IW93 802 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ZNF786Q8N393 782 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 ADAM32Q8TC27 787 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 MAGEB18Q96M61 343 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 GLIS2Q9BZE0 524 aaPredicted RBP13.59□□□□□ -0.23
SCN8A-202ENST00000355133 RERGLQ9H628 205 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 SNCAIPQ9Y6H5 919 aa13.59□□□□□ -0.23
SCN8A-202ENST00000355133 NDUFB5O43674 189 aa13.58□□□□□ -0.23
SCN8A-202ENST00000355133 MT-CO1P00395 513 aa13.58□□□□□ -0.23
SCN8A-202ENST00000355133 POU1F1P28069 291 aa13.58□□□□□ -0.23
SCN8A-202ENST00000355133 ANXA11P50995 505 aaKnown RBP13.58□□□□□ -0.23
SCN8A-202ENST00000355133 ATP6AP1LQ52LC2 224 aa13.58□□□□□ -0.23
SCN8A-202ENST00000355133 REPS2Q8NFH8 660 aa13.58□□□□□ -0.23
SCN8A-202ENST00000355133 P2RX7Q99572 595 aaKnown RBP13.58□□□□□ -0.23
SCN8A-202ENST00000355133 SLC40A1Q9NP59 571 aa13.58□□□□□ -0.23
SCN8A-202ENST00000355133 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.23
SCN8A-202ENST00000355133 HPSEQ9Y251 543 aa13.58□□□□□ -0.23
SCN8A-202ENST00000355133 O00370 1275 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 MICAL2O94851 1124 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 ZNF682O95780 498 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 BGNP21810 368 aa13.58□□□□□ -0.24
SCN8A-202ENST00000355133 RANBP1P43487 201 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms