RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 EPB41L1Q9H4G0 881 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 POLMQ9NP87 494 aaPredicted RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 FBXO28Q9NVF7 368 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 NR2E3Q9Y5X4 410 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 SH3PXD2BA1X283 911 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 CDK2AP1O14519 115 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 PEX10O60683 326 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 SOX11P35716 441 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 FMO1Q01740 532 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 ZNF211Q13398 564 aaPredicted RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 TMEM132BQ14DG7 1078 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 WDR72Q3MJ13 1102 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 KCTD21Q4G0X4 260 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 SLC13A5Q86YT5 568 aaPredicted RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 LSMEM2Q8N112 164 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 SHC3Q92529 594 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 SNX25Q9H3E2 840 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 RXFP1Q9HBX9 757 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 LGALS13Q9UHV8 139 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 B4GALT4O60513 344 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 TSPAN1O60635 241 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 LYPLA2O95372 231 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 STAMBPO95630 424 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 BMP3P12645 472 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 TAL1P17542 331 aaPredicted RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 RPL17P18621 184 aaKnown RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 COMTP21964 271 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 ALCAMQ13740 583 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 CCDC137Q6PK04 289 aaKnown RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 RFPL4BQ6ZWI9 263 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 INTS8Q75QN2 995 aaKnown RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 AGGF1Q8N302 714 aaeCLIP11.22□□□□□ -0.61
SND1-201ENST00000354725 MYCT1Q8N699 235 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 EPS8L3Q8TE67 593 aaKnown RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 KREMEN1Q96MU8 473 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 AZI2Q9H6S1 392 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 DBR1Q9UK59 544 aaKnown RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 DOLKQ9UPQ8 538 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 SNX24Q9Y343 169 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 LRRN2O75325 713 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 FAM13AO94988 1023 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 OR6B1O95007 311 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 UNC5CO95185 931 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 FTLP02792 175 aaPredicted RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 FGFR4P22455 802 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 GTF2BQ00403 316 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 ZYXQ15942 572 aaKnown RBP11.22□□□□□ -0.61
SND1-201ENST00000354725 ZNF423Q2M1K9 1284 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 IL31Q6EBC2 164 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 PRR23CQ6ZRP0 262 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 CROCCP3Q8IVE0 287 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 FITM2Q8N6M3 262 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 ANKLE1Q8NAG6 615 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 RIN3Q8TB24 985 aa11.22□□□□□ -0.61
SND1-201ENST00000354725 FAM221BA6H8Z2 402 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 ARHGAP33O14559 1287 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 KMOO15229 486 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 DHX15O43143 795 aaKnown RBP11.21□□□□□ -0.61
SND1-201ENST00000354725 ENTPD5O75356 428 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 NCAM1P13591 858 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 ETFBP38117 255 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 VPS41P49754 854 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 HSD17B4P51659 736 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 AP3M2P53677 418 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 PLTPP55058 493 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 PPP1R2P3Q6NXS1 205 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 PGBD3Q8N328 593 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 UBL4BQ8N7F7 174 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 SERPINB12Q96P63 405 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 KLHL4Q9C0H6 718 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 KIAA1217Q5T5P2 1943 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 ADGRA3Q8IWK6 1321 aa11.21□□□□□ -0.61
SND1-201ENST00000354725 SUN1O94901 812 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 ABCB4P21439 1286 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 HOXA13P31271 388 aaPredicted RBP11.21□□□□□ -0.62
SND1-201ENST00000354725 OAZ1P54368 228 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 SNAP25P60880 206 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 GBE1Q04446 702 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 TMEM63BQ5T3F8 832 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 CGB2Q6NT52 195 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 OR7G1Q8NGA0 311 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 GIPC3Q8TF64 312 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 SLC7A3Q8WY07 619 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 E2F7Q96AV8 911 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 PARK7Q99497 189 aaKnown RBP11.21□□□□□ -0.62
SND1-201ENST00000354725 NEURL2Q9BR09 285 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 LUZP4Q9P127 313 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 A0A088AWK7 358 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 FUOMA2VDF0 154 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 WEE1P30291 646 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 NEK3P51956 506 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 NCKAP1LP55160 1127 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 PTP4A2Q12974 167 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 KLF1Q13351 362 aaPredicted RBP11.21□□□□□ -0.62
SND1-201ENST00000354725 TGFBIQ15582 683 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms