RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 OTUD1Q5VV17 481 aaPredicted RBP20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 DQX1Q8TE96 717 aaKnown RBP20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 PGAP3Q96FM1 320 aaPredicted RBP20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 PSMB7Q99436 277 aa20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 ZNF334Q9HCZ1 680 aaPredicted RBP20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 TRPM5Q9NZQ8 1165 aa20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 CALCOCO1Q9P1Z2 691 aa20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 PCSK1NQ9UHG2 260 aa20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 USP18Q9UMW8 372 aa20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 COL4A4P53420 1690 aaPredicted RBP20.98■□□□□ 0.95
SIGMAR1-202ENST00000353468 KCNK3O14649 394 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 RFPL2O75678 378 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 TRUB2O95900 331 aaKnown RBP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 TCP1P17987 556 aaKnown RBP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 HOXA9P31269 272 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 PPP3CCP48454 512 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 MARCKSL1P49006 195 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 ATXN1P54253 815 aaKnown RBP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 SLC25A11Q02978 314 aaKnown RBP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 DEUP1Q05D60 604 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 LRRC38Q5VT99 294 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 SNX30Q5VWJ9 437 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 SCYL2Q6P3W7 929 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 ELMSAN1Q6PJG2 1045 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 RSRC2Q7L4I2 434 aaKnown RBP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 ADAM32Q8TC27 787 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 PPP2R3CQ969Q6 453 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 OSBPL9Q96SU4 736 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 CDCA3Q99618 268 aaPredicted RBP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 NUDT5Q9UKK9 219 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 ZNF840PA6NDX5 716 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 PRPSAP2O60256 369 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 HNRNPA1P09651 372 aaKnown RBP eCLIP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 IL1R2P27930 398 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 CXCR5P32302 372 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 RDXP35241 583 aaKnown RBP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 GJC1P36383 396 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 NME3Q13232 169 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 TXNRD3NBQ6F5E7 133 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 MSANTD2Q6P1R3 559 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 TAC4Q86UU9 113 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 ALG3Q92685 438 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 FAM204AQ9H8W3 233 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 OLA1Q9NTK5 396 aaKnown RBP20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 DDIT4Q9NX09 232 aa20.97■□□□□ 0.95
SIGMAR1-202ENST00000353468 SYNJ2BP-COX16A0A087WUM0 186 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 SRGAP2O75044 1071 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 F9P00740 461 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 IGLV3-25P01717 112 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 F11P03951 625 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 KRT7P08729 469 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 GBP1P32455 592 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 RWDD2BP57060 319 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 PABPC1LQ4VXU2 614 aaKnown RBP20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 POLNQ7Z5Q5 900 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 HS6ST3Q8IZP7 471 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 ZNF276Q8N554 614 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 CASP10Q92851 521 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 LRRC3Q9BY71 257 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 SMOC2Q9H3U7 446 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 ZWILCHQ9H900 591 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 IL21Q9HBE4 155 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 ZDHHC7Q9NXF8 308 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 COX16Q9P0S2 106 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 SFMBT1Q9UHJ3 866 aa20.96■□□□□ 0.95
SIGMAR1-202ENST00000353468 TMEM265A0A087WTH1 108 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 SPDYE4A6NLX3 237 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 TLR5O60602 858 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 TADA3O75528 432 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 ATP13A4Q4VNC1 1196 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 BOLA3Q53S33 107 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 TMEM150AQ86TG1 271 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 TMC8Q8IU68 726 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 PBKQ96KB5 322 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 PEBP4Q96S96 227 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 NSUN3Q9H649 340 aaKnown RBP20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 CCSER2Q9H7U1 834 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 WDR6Q9NNW5 1121 aaKnown RBP20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 PIGVQ9NUD9 493 aa20.95■□□□□ 0.94
SIGMAR1-202ENST00000353468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.95■□□□□ 0.944e-14■■■□□ 16.1
SIGMAR1-202ENST00000353468 TBX18O95935 607 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 GTF2F1P35269 517 aaKnown RBP eCLIP20.94■□□□□ 0.944e-6■□□□□ 9.6
SIGMAR1-202ENST00000353468 RBM10P98175 930 aaKnown RBP20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 EIF4EBP2Q13542 120 aaPredicted RBP20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 KCNC3Q14003 757 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 SMTNL2Q2TAL5 461 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 KCNT1Q5JUK3 1230 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 C10orf120Q5SQS8 335 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 HECTD3Q5T447 861 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 ZFYVE27Q5T4F4 411 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 ZNF697Q5TEC3 545 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 DCAF12L1Q5VU92 463 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 CYP4V2Q6ZWL3 525 aaPredicted RBP20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 SND1Q7KZF4 910 aaKnown RBP eCLIP20.94■□□□□ 0.947e-7■■■□□ 17
SIGMAR1-202ENST00000353468 FAM131BQ86XD5 332 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 KATNAL2Q8IYT4 538 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 COG1Q8WTW3 980 aa20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 CDK5RAP1Q96SZ6 601 aaKnown RBP20.94■□□□□ 0.94
SIGMAR1-202ENST00000353468 CORO1BQ9BR76 489 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms