RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MAMDC4Q6UXC1 1216 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 KDM7AQ6ZMT4 941 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 SH2D3CQ8N5H7 860 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 EMC1Q8N766 993 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 ACTL9Q8TC94 416 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 STK32AQ8WU08 396 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 MRPS31Q92665 395 aaKnown RBP12.58□□□□□ -0.4
SMAD9-201ENST00000350148 TTC17Q96AE7 1141 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 CAPNS2Q96L46 248 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 Q9H521 79 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 SMYD2Q9NRG4 433 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 OR6C75A6NL08 312 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 E5RJQ4 531 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 HNRNPCL1O60812 293 aaKnown RBP12.58□□□□□ -0.4
SMAD9-201ENST00000350148 LTFP02788 710 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 RARAP10276 462 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 MIPP30301 263 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 TUSC3Q13454 348 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 LRRC49Q8IUZ0 686 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 WNT8BQ93098 351 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 SNX27Q96L92 541 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 EPN3Q9H201 632 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 DDX20Q9UHI6 824 aaKnown RBP12.58□□□□□ -0.4
SMAD9-201ENST00000350148 MMP8P22894 467 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 KDELR1P24390 212 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 MLH1P40692 756 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 DDX42Q86XP3 938 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMAD9-201ENST00000350148 ANKMY2Q8IV38 441 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMAD9-201ENST00000350148 AENQ8WTP8 325 aaKnown RBP12.58□□□□□ -0.4
SMAD9-201ENST00000350148 FAM210AQ96ND0 272 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 TMEM39AQ9NV64 488 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 TAS2R14Q9NYV8 317 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 UBAP1Q9NZ09 502 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 DMGDHQ9UI17 866 aaKnown RBP12.58□□□□□ -0.4
SMAD9-201ENST00000350148 TSC22D4Q9Y3Q8 395 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 A0A1B0GUL6 1792 aa12.58□□□□□ -0.4
SMAD9-201ENST00000350148 SF3B1O75533 1304 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMAD9-201ENST00000350148 DAB1O75553 588 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 SCNN1GP51170 649 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 HDAC4P56524 1084 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-201ENST00000350148 KYNUQ16719 465 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 VPS11Q9H270 941 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 SIX2Q9NPC8 291 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-201ENST00000350148 SDR42E2A6NKP2 422 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 FSCN2O14926 492 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 GUCY1A3Q02108 690 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 ZNF177Q13360 481 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-201ENST00000350148 TRADDQ15628 312 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 SLC30A9Q6PML9 568 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 TEKT4Q8WW24 435 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 LRRC39Q96DD0 335 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 C9orf72Q96LT7 481 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 TGS1Q96RS0 853 aaKnown RBP12.57□□□□□ -0.4
SMAD9-201ENST00000350148 RCCD1A6NED2 376 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 RNF225M0QZC1 329 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-201ENST00000350148 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-201ENST00000350148 YWHAQP27348 245 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 NAB1Q13506 487 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 SLC29A2Q14542 456 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 RASAL3Q86YV0 1011 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 NUDCD3Q8IVD9 361 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 DEFB106AQ8N104 65 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 RNF208Q9H0X6 261 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 TMBIM4Q9HC24 238 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 TRIM33Q9UPN9 1127 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 LY75O60449 1722 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 APOA4P06727 396 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 CDK16Q00536 496 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 SLC20A2Q08357 652 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 MREGQ8N565 214 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 ZNF670Q9BS34 389 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 RMI1Q9H9A7 625 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 TRPC7Q9HCX4 862 aa12.57□□□□□ -0.4
SMAD9-201ENST00000350148 ADSSP30520 456 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 C2CD6Q53TS8 623 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 MFSD7Q6UXD7 560 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ANKS3Q6ZW76 656 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ZNF557Q8N988 423 aaPredicted RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 YME1L1Q96TA2 773 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 CENPKQ9BS16 269 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 DUSP16Q9BY84 665 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 TBC1D13Q9NVG8 400 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ATP11BQ9Y2G3 1177 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 CYP1A1P04798 512 aaPredicted RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 WSCD1Q658N2 575 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 TSSK1BQ9BXA7 367 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 LRRC40Q9H9A6 602 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 TXNRD2Q9NNW7 524 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 hCG_2014768A0A024R1R8 64 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 TMEM191CA6NGB0 347 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 GRK4P32298 578 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 TARBP2Q15633 366 aaKnown RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 KCNT1Q5JUK3 1230 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms