RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 APPL1Q9UKG1 709 aa19.33■□□□□ 0.69
SCARF1-202ENST00000348987 RGPD3A6NKT7 1758 aaPredicted RBP19.33■□□□□ 0.68
SCARF1-202ENST00000348987 RGPD4Q7Z3J3 1758 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 FER1L6Q2WGJ9 1857 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 hCG_1818297A0A087WSY0 165 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 TRIM49D1C9J1S8 452 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 E7ESA3 106 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 ELK3P41970 407 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 NOMO3P69849 1222 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 FSTL1Q12841 308 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 SNAPC2Q13487 334 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.68
SCARF1-202ENST00000348987 WDR44Q5JSH3 913 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 FAM182AQ5T1J6 154 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 ZCCHC23Q6ZST2 131 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 TRIM67Q6ZTA4 783 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 ENOSF1Q7L5Y1 443 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 GPRASP2Q96D09 838 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 SENP7Q9BQF6 1050 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 SENP6Q9GZR1 1112 aaPredicted RBP19.33■□□□□ 0.68
SCARF1-202ENST00000348987 AGO2Q9UKV8 859 aaKnown RBP19.33■□□□□ 0.68
SCARF1-202ENST00000348987 TDRKHQ9Y2W6 561 aaKnown RBP19.33■□□□□ 0.68
SCARF1-202ENST00000348987 DTNAQ9Y4J8 743 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 NUB1Q9Y5A7 615 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 PCDHB4Q9Y5E5 795 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 MAD1L1Q9Y6D9 718 aa19.33■□□□□ 0.68
SCARF1-202ENST00000348987 SDR42E2A6NKP2 422 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 F8VP50 259 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 AOC1P19801 751 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 RPL22P35268 128 aaKnown RBP19.32■□□□□ 0.68
SCARF1-202ENST00000348987 CLDN10P78369 228 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 COG7P83436 770 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 GK3PQ14409 553 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 TEX44Q53QW1 395 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 PLEKHA7Q6IQ23 1121 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 HPS6Q86YV9 775 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 NUDCD3Q8IVD9 361 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 MCPH1Q8NEM0 835 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 FEZF2Q8TBJ5 459 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 CDH22Q9UJ99 828 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 POMPQ9Y244 141 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 PLLPQ9Y342 182 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 HBS1LQ9Y450 684 aaKnown RBP19.32■□□□□ 0.68
SCARF1-202ENST00000348987 GNA15P30679 374 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 SLC5A2P31639 672 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 MRPS5P82675 430 aaKnown RBP19.32■□□□□ 0.68
SCARF1-202ENST00000348987 PSMD6Q15008 389 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 TFDP3Q5H9I0 405 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 MARVELD2Q8N4S9 558 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 DIS3LQ8TF46 1054 aaKnown RBP19.32■□□□□ 0.68
SCARF1-202ENST00000348987 TARS2Q9BW92 718 aaKnown RBP19.32■□□□□ 0.68
SCARF1-202ENST00000348987 ARHGEF38Q9NXL2 777 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 SLC9A2Q9UBY0 812 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 DMTF1Q9Y222 760 aa19.32■□□□□ 0.68
SCARF1-202ENST00000348987 TTLL13PA6NNM8 815 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 DNAJA2O60884 412 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 ZC3H11AO75152 810 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCARF1-202ENST00000348987 PSAPP07602 524 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 NRLP54845 237 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 YWHAGP61981 247 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCARF1-202ENST00000348987 CUL2Q13617 745 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 HSP90AA5PQ58FG0 334 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 IYDQ6PHW0 289 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 ABHD15Q6UXT9 468 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 ZBTB8BQ8NAP8 495 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-202ENST00000348987 SLC35B2Q8TB61 432 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 APOL6Q9BWW8 343 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 H3BNX3 289 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 ALDH1A3P47895 512 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 SERPINB8P50452 374 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 HMGCS2P54868 508 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 EMC2Q15006 297 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 LRRC8BQ6P9F7 803 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 PGM2L1Q6PCE3 622 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 KLHL35Q6PF15 583 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 TSHZ1Q6ZSZ6 1077 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 ABRAQ8N0Z2 381 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 RDM1Q8NG50 284 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 CNBD2Q96M20 576 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 PRPF18Q99633 342 aaKnown RBP19.31■□□□□ 0.68
SCARF1-202ENST00000348987 RBAKQ9NYW8 714 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-202ENST00000348987 FBXO40Q9UH90 709 aa19.31■□□□□ 0.68
SCARF1-202ENST00000348987 ZNF214Q9UL59 606 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-202ENST00000348987 KIAA1217Q5T5P2 1943 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 LRRIQ4A6NIV6 560 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 H3BSA7 217 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 CASQ2O14958 399 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 BASP1P80723 227 aaKnown RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 OTUD4Q01804 1114 aaKnown RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 PEX6Q13608 980 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 ZNF677Q86XU0 584 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 CTAGE3PQ8IX95 158 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 RNF168Q8IYW5 571 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 TTC13Q8NBP0 860 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 REPS2Q8NFH8 660 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 ACTL9Q8TC94 416 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 JADE3Q92613 823 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 DCUN1D1Q96GG9 259 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms