RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 MAMLD1Q13495 774 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 PSMD6Q15008 389 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 TTC39BQ5VTQ0 682 aaPredicted RBP10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 ANKRD22Q5VYY1 191 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 KAZNQ674X7 775 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 XRRA1Q6P2D8 792 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 SPOCD1Q6ZMY3 1216 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 CDHR3Q6ZTQ4 885 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 ARCQ7LC44 396 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 ZSWIM2Q8NEG5 633 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 SLC35B2Q8TB61 432 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 FEZF2Q8TBJ5 459 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 MASTLQ96GX5 879 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 COX4I2Q96KJ9 171 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 KCNK16Q96T55 309 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 SENP7Q9BQF6 1050 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 MECRQ9BV79 373 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 KLC2Q9H0B6 622 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 KMT5AQ9NQR1 393 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 TMOD2Q9NZR1 351 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 PCDHGB4Q9UN71 923 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 PCDHGB5Q9Y5G0 923 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 SQORQ9Y6N5 450 aa10.69□□□□□ -0.7
CHRNA1-202ENST00000348749 SORBS2O94875 1100 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 FBXO21O94952 628 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 PROCP04070 461 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 MYL4P12829 197 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ITGAXP20702 1163 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 PRDX6P30041 224 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 HALP42357 657 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 PTGER2P43116 358 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 CBLBQ13191 982 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 MTMR1Q13613 665 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ADGRE1Q14246 886 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ZACNQ401N2 412 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 FAM102BQ5T8I3 360 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ANGEL2Q5VTE6 544 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 TMEM53Q6P2H8 277 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 MFSD7Q6UXD7 560 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 NUDCD3Q8IVD9 361 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 PDIK1LQ8N165 341 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 LZTR1Q8N653 840 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 CPA5Q8WXQ8 436 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 POMGNT1Q8WZA1 660 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 CCDC97Q96F63 343 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 CNBD2Q96M20 576 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 PHF12Q96QT6 1004 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 EBF4Q9BQW3 602 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 TMEM121Q9BTD3 319 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 INO80BQ9C086 356 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 PNPLA8Q9NP80 782 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 THAP1Q9NVV9 213 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 RRN3Q9NYV6 651 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ZNF180Q9UJW8 692 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 APPL1Q9UKG1 709 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ZBTB21Q9ULJ3 1066 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 FADS3Q9Y5Q0 445 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 SCN9AQ15858 1988 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 hCG_1818297A0A087WSY0 165 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 TCRBV9S1A1TA0A576 114 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 EXTL3O43909 919 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 TBC1D12O60347 775 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 LSM8O95777 96 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 KRT1P04264 644 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 CALB1P05937 261 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 KITP10721 976 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 RBP3P10745 1247 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ATF7P17544 494 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 GJC1P36383 396 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 PHKA2P46019 1235 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 MRPS5P82675 430 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 BCL2A1Q16548 175 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 XKR9Q5GH70 373 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 PLA2G4FQ68DD2 849 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 RWDD4Q6NW29 188 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 LLGL2Q6P1M3 1020 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ZFP1Q6P2D0 407 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 IYDQ6PHW0 289 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 SLC26A11Q86WA9 606 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 HPS6Q86YV9 775 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 WDR75Q8IWA0 830 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 POU5F2Q8N7G0 328 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 MCPH1Q8NEM0 835 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 GIPC3Q8TF64 312 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 CCDC124Q96CT7 223 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 CMTM5Q96DZ9 223 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 AGAP3Q96P47 875 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 FAM96AQ9H5X1 160 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 DHX33Q9H6R0 707 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 ARID2Q68CP9 1835 aa10.68□□□□□ -0.7
CHRNA1-202ENST00000348749 COL11A2P13942 1736 aaPredicted RBP10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 CCDC162PA2VCL2 907 aa10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 PI4K2BG5E9Z4 385 aa10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 DDX39AO00148 427 aaKnown RBP10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 TLR3O15455 904 aaKnown RBP10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 IFNB1P01574 187 aa10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 BPGMP07738 259 aa10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 SNRPAP09012 282 aaKnown RBP10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 THRAP10827 490 aa10.67□□□□□ -0.7
CHRNA1-202ENST00000348749 ACO1P21399 889 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms