RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 DBR1Q9UK59 544 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-202ENST00000348513 SPAG6O75602 509 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 SV2CQ496J9 727 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 C9orf131Q5VYM1 1079 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TTC27Q6P3X3 843 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 FBXO16Q8IX29 292 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 SIPA1Q96FS4 1042 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 ELMO2Q96JJ3 720 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 SPATA16Q9BXB7 569 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 EMILIN2Q9BXX0 1053 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 ABI2Q9NYB9 513 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TUBGCP4Q9UGJ1 667 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TRMT6Q9UJA5 497 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 PHTF1Q9UMS5 762 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 C3orf70A6NLC5 250 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 KIAA0391O15091 583 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 EXTL3O43909 919 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 MGRN1O60291 552 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TLR2O60603 784 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 CD4P01730 458 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TTKP33981 857 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 CPT1AP50416 773 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 CDK7P50613 346 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 ST8SIA6P61647 398 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 ABATP80404 500 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TOP3AQ13472 1001 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 STAT4Q14765 748 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 LONRF1Q17RB8 773 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TYSND1Q2T9J0 566 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 SYTL3Q4VX76 610 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 ASAP3Q8TDY4 903 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 HPDLQ96IR7 371 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 CNDP1Q96KN2 507 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TRIM54Q9BYV2 358 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 DOLKQ9UPQ8 538 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 PHGDHO43175 533 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 HBP1O60381 514 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 CDC42EP1Q00587 391 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 EFHC1Q5JVL4 640 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 HDAC2Q92769 488 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 GPATCH1Q9BRR8 931 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 TMEM79Q9BSE2 394 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 C17orf102A2RUQ5 167 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 BMP10O95393 424 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 RPS12P25398 132 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 SH3D19Q5HYK7 790 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 CORO1BQ9BR76 489 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 NMRK1Q9NWW6 199 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 NAGPAQ9UK23 515 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 SPATA2Q9UM82 520 aa11.42□□□□□ -0.58
SMARCE1-202ENST00000348513 IL18RAPO95256 599 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 VTNP04004 478 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 RPA1P27694 616 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 EPHB2P29323 1055 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 CAP2P40123 477 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TWF1Q12792 350 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 KIZQ2M2Z5 673 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 KLHL17Q6TDP4 642 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 ADCK2Q7Z695 626 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TXNRD3Q86VQ6 643 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 PM20D2Q8IYS1 436 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 MICU2Q8IYU8 434 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 CCDC33Q8N5R6 958 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 AGBL3Q8NEM8 1001 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 SH3TC2Q8TF17 1288 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TATDN2Q93075 761 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 CPB2Q96IY4 423 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TRABDQ9H4I3 376 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 AURKCQ9UQB9 309 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 IGSF9BQ9UPX0 1349 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 NCAM1P13591 858 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 C10orf120Q5SQS8 335 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 LLGL2Q6P1M3 1020 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TMEM245Q9H330 911 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 A0A087WXM4 84 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TRMUO75648 421 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 CCNKO75909 580 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 SOX11P35716 441 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 CLCN3P51790 818 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 MARSP56192 900 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 EFR3AQ14156 821 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 C2CD6Q53TS8 623 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 NOTUMQ6P988 496 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 LAYNQ6UX15 382 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 PLEKHM3Q6ZWE6 761 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 C9orf72Q96LT7 481 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 RIT2Q99578 217 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TMEM8AQ9HCN3 771 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 RPL26L1Q9UNX3 145 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 PHF24Q9UPV7 400 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 CLCA2Q9UQC9 943 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 USP1O94782 785 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 MED26O95402 600 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 ICAM1P05362 532 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 ALOX12P18054 663 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 CASP4P49662 377 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 SUZ12Q15022 739 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 MAPRE2Q15555 327 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms