RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PRKD2Q9BZL6 878 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 RAB6CQ9H0N0 254 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 TRPM5Q9NZQ8 1165 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 USTQ9Y2C2 406 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 SPOPO43791 374 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 GLP2RO95838 553 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 IGLV3-25P01717 112 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 RARGP13631 454 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 PCK1P35558 622 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 SULT1E1P49888 294 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 CDO1Q16878 200 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 HS6ST3Q8IZP7 471 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 CASP10Q92851 521 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 LRCH3Q96II8 777 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 SMOC2Q9H3U7 446 aa28.25■■■□□ 2.11
SSBP4-202ENST00000348495 PACSIN2Q9UNF0 486 aaPredicted RBP28.25■■■□□ 2.11
SSBP4-202ENST00000348495 ENC1O14682 589 aa28.24■■■□□ 2.11
SSBP4-202ENST00000348495 RNF8O76064 485 aa28.24■■■□□ 2.11
SSBP4-202ENST00000348495 TCF4P15884 667 aa28.24■■■□□ 2.11
SSBP4-202ENST00000348495 TAS2R40P59535 323 aa28.24■■■□□ 2.11
SSBP4-202ENST00000348495 EIF4EBP2Q13542 120 aaPredicted RBP28.24■■■□□ 2.11
SSBP4-202ENST00000348495 ADGRE1Q14246 886 aa28.24■■■□□ 2.11
SSBP4-202ENST00000348495 GAREM2Q75VX8 874 aa28.24■■■□□ 2.11
SSBP4-202ENST00000348495 IGFLR1Q9H665 355 aa28.24■■■□□ 2.11
SSBP4-202ENST00000348495 MTCH2Q9Y6C9 303 aa28.24■■■□□ 2.11
SSBP4-202ENST00000348495 M0QYT0 321 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 NCK2O43639 380 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 XYLBO75191 536 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 ATP1A1P05023 1023 aaKnown RBP28.23■■■□□ 2.11
SSBP4-202ENST00000348495 RALAP11233 206 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 TUBP50607 506 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 ZNF697Q5TEC3 545 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 TAC4Q86UU9 113 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 CMASQ8NFW8 434 aaPredicted RBP28.23■■■□□ 2.11
SSBP4-202ENST00000348495 NAPGQ99747 312 aaPredicted RBP28.23■■■□□ 2.11
SSBP4-202ENST00000348495 NCAPGQ9BPX3 1015 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 CORO1BQ9BR76 489 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 DZANK1Q9NVP4 752 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 HCFC1R1Q9NWW0 138 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 DNMT3BQ9UBC3 853 aaKnown RBP28.23■■■□□ 2.11
SSBP4-202ENST00000348495 OBSL1O75147 1896 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 CCDC195A0A1B0GUA6 201 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 TRUB2O95900 331 aaKnown RBP28.23■■■□□ 2.11
SSBP4-202ENST00000348495 MIPP30301 263 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 SLC25A11Q02978 314 aaKnown RBP28.23■■■□□ 2.11
SSBP4-202ENST00000348495 PABPC1LQ4VXU2 614 aaKnown RBP28.23■■■□□ 2.11
SSBP4-202ENST00000348495 ADAM32Q8TC27 787 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 RNF139Q8WU17 664 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 CCSER2Q9H7U1 834 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 ASAH2Q9NR71 780 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 NUDT5Q9UKK9 219 aa28.23■■■□□ 2.11
SSBP4-202ENST00000348495 PRRC2BQ5JSZ5 2229 aaKnown RBP28.23■■■□□ 2.11
SSBP4-202ENST00000348495 ANAPC1Q9H1A4 1944 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 CTAGE9A4FU28 777 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 TLR5O60602 858 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 DESP17661 470 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 PTPN2P17706 415 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 CTNNA2P26232 953 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 CASQ1P31415 396 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 CTNNA1P35221 906 aaKnown RBP28.22■■■□□ 2.11
SSBP4-202ENST00000348495 LRRC38Q5VT99 294 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 SFXN1Q9H9B4 322 aa28.22■■■□□ 2.11
SSBP4-202ENST00000348495 OLA1Q9NTK5 396 aaKnown RBP28.22■■■□□ 2.11
SSBP4-202ENST00000348495 MIF4GDA9UHW6 222 aaKnown RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 DDX3YO15523 660 aaKnown RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 GABRR2P28476 465 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 RDXP35241 583 aaKnown RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 ATXN1P54253 815 aaKnown RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 KLHDC10Q6PID8 442 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 CYP4V2Q6ZWL3 525 aaPredicted RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 RSRC2Q7L4I2 434 aaKnown RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 KRT35Q92764 455 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 CDK5RAP1Q96SZ6 601 aaKnown RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 PIGVQ9NUD9 493 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 LINC01565O15544 149 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 TBX18O95935 607 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 IL1R2P27930 398 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 MARCKSL1P49006 195 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 RPS6KA1Q15418 735 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 HECTD3Q5T447 861 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 PAPD7Q5XG87 772 aaKnown RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 C12orf76Q8N812 135 aaPredicted RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 LEMD2Q8NC56 503 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 PEBP4Q96S96 227 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 FAM204AQ9H8W3 233 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 WDR6Q9NNW5 1121 aaKnown RBP28.21■■■□□ 2.11
SSBP4-202ENST00000348495 DDIT4Q9NX09 232 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 SFMBT1Q9UHJ3 866 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 USP18Q9UMW8 372 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 PCDHA3Q9Y5H8 950 aa28.21■■■□□ 2.11
SSBP4-202ENST00000348495 DENND4CQ5VZ89 1909 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 CCDC66A2RUB6 948 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 NRG2O14511 850 aaPredicted RBP28.2■■■□□ 2.1
SSBP4-202ENST00000348495 IRAK2O43187 625 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 PSTPIP1O43586 416 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 F9P00740 461 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 OAS1P00973 400 aaKnown RBP28.2■■■□□ 2.1
SSBP4-202ENST00000348495 CDC25CP30307 473 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 PEX5P50542 639 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 DEUP1Q05D60 604 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms