RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 CDRT15Q96T59 188 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 CCDC167Q9P0B6 97 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 SIGLEC1Q9BZZ2 1709 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 BUD23O43709 281 aaKnown RBP10.8□□□□□ -0.68
SMG7-201ENST00000347615 SPAG6O75602 509 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 PSMG1O95456 288 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 FAM83EQ2M2I3 478 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 OTUD3Q5T2D3 398 aaPredicted RBP10.8□□□□□ -0.68
SMG7-201ENST00000347615 TEDDM1Q5T9Z0 273 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 POTEAQ6S8J7 498 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 ADCK1Q86TW2 530 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 KREMEN1Q96MU8 473 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 TMEM79Q9BSE2 394 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 COG4Q9H9E3 785 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 SLC24A2Q9UI40 661 aa10.8□□□□□ -0.68
SMG7-201ENST00000347615 CES2O00748 559 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 TM9SF1O15321 606 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 LIASO43766 372 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 RHOBTB1O94844 696 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 PSMC3P17980 439 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 ITGB6P18564 788 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 CDK16Q00536 496 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 DDR1Q08345 913 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 ADIGQ0VDE8 80 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 MAPRE2Q15555 327 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 PARP8Q8N3A8 854 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 TTYH3Q9C0H2 523 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 DCDC2Q9UHG0 476 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 GLRA2P23416 452 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 MGAT5BQ3V5L5 792 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 SNX32Q86XE0 403 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 ZNF384Q8TF68 577 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 OMDQ99983 421 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 SETD4Q9NVD3 440 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 GPRC5DQ9NZD1 345 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 SLC26A4O43511 780 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 RPL22P35268 128 aaKnown RBP10.79□□□□□ -0.68
SMG7-201ENST00000347615 BACE1P56817 501 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 PTK2BQ14289 1009 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 KCNT2Q6UVM3 1135 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 SCAMP3O14828 347 aaKnown RBP10.79□□□□□ -0.68
SMG7-201ENST00000347615 FAM200BP0CF97 657 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 ATP1A4Q13733 1029 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 RIPOR1Q6ZS17 1223 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 CNPY3Q9BT09 278 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 PRMT7Q9NVM4 692 aaPredicted RBP10.79□□□□□ -0.68
SMG7-201ENST00000347615 PKP3Q9Y446 797 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 MST1RQ04912 1400 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 HLA-DPA1P20036 260 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 HDAC4P56524 1084 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 OTOAQ7RTW8 1153 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 UNC45BQ8IWX7 931 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 THUMPD3Q9BV44 507 aaKnown RBP10.79□□□□□ -0.68
SMG7-201ENST00000347615 MUC3BQ9H195 1237 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 RNPEPL1Q9HAU8 725 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 MRPL40Q9NQ50 206 aaKnown RBP10.79□□□□□ -0.68
SMG7-201ENST00000347615 PDP2Q9P2J9 529 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 PCYOX1Q9UHG3 505 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 VANGL2Q9ULK5 521 aa10.79□□□□□ -0.68
SMG7-201ENST00000347615 ARHGEF37A1IGU5 675 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 VDRP11473 427 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 ITGB5P18084 799 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 KDELR1P24390 212 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 OR1G1P47890 313 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 WDR49Q8IV35 697 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 KIAA2013Q8IYS2 634 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 FITM2Q8N6M3 262 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMG7-201ENST00000347615 ARL8BQ9NVJ2 186 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 UMODL1Q5DID0 1318 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 ARHGAP23Q9P227 1491 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 SERPIND1P05546 499 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
SMG7-201ENST00000347615 SLC1A5Q15758 541 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 GJC2Q5T442 439 aaPredicted RBP10.78□□□□□ -0.68
SMG7-201ENST00000347615 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
SMG7-201ENST00000347615 TTC30AQ86WT1 665 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 MREGQ8N565 214 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 STKLD1Q8NE28 680 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 SH3GL2Q99962 352 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 VWA5AO00534 786 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 PRPF4O43172 522 aaKnown RBP eCLIP10.78□□□□□ -0.688e-8■■■□□ 19
SMG7-201ENST00000347615 HBP1O60381 514 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 CYP1A2P05177 515 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 SERPINB8P50452 374 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 NRLP54845 237 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 KCNK10P57789 538 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 SNRPFP62306 86 aaKnown RBP10.78□□□□□ -0.68
SMG7-201ENST00000347615 GTF2H3Q13889 308 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 TMPRSS6Q8IU80 811 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 FAM71AQ8IYT1 594 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 CATSPER1Q8NEC5 780 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 BEGAINQ9BUH8 593 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 TCF7L2Q9NQB0 619 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 CLIC5Q9NZA1 410 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.78□□□□□ -0.68
SMG7-201ENST00000347615 ASB14A6NK59 587 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 CYB561D2O14569 222 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 SH3BGRLO75368 114 aa10.78□□□□□ -0.68
SMG7-201ENST00000347615 KATNA1O75449 491 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms