RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 LRFN2Q9ULH4 789 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 ZC3H4Q9UPT8 1303 aaKnown RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 URB1O60287 2271 aaKnown RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 CCL22O00626 93 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 STRNO43815 780 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 DNAJC6O75061 913 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 GNAT1P11488 350 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 POU6F1Q14863 301 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 SYPL2Q5VXT5 272 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 MFSD14CQ5VZR4 134 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.21e-8■■■□□ 14.6
CASC4-202ENST00000345795 MOCOSQ96EN8 888 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 PEBP4Q96S96 227 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 ASB7Q9H672 318 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 ZFYVE28Q9HCC9 887 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 PDLIM7Q9NR12 457 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 PSMC3IPQ9P2W1 217 aaPredicted RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 TTC24A2A3L6 582 aaPredicted RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 MGAT1P26572 445 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 CPT1AP50416 773 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SLC12A2P55011 1212 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SARNPP82979 210 aaKnown RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 FOXD4Q12950 439 aaPredicted RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 SPRED3Q2MJR0 410 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 LGSNQ5TDP6 509 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SPRYD7Q5W111 196 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 TAPT1Q6NXT6 567 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 CFAP61Q8NHU2 1237 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SYT15Q9BQS2 421 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 PTPRHQ9HD43 1115 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 WDR35Q9P2L0 1181 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 PHTF1Q9UMS5 762 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 USP15Q9Y4E8 981 aaPredicted RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 GAS2O43903 313 aaKnown RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 PQBP1O60828 265 aaKnown RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 TADA2AO75478 443 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 TRUB2O95900 331 aaKnown RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 SOX4Q06945 474 aaPredicted RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 SLC12A1Q13621 1099 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 PTK6Q13882 451 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 CNGA2Q16280 664 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 DDR2Q16832 855 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SH3D19Q5HYK7 790 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 NUDCD3Q8IVD9 361 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SCAMP5Q8TAC9 235 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 C16orf70Q9BSU1 422 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 FSD1LQ9BXM9 530 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 UBXN6Q9BZV1 441 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 WDCPQ9H6R7 721 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 ZBTB42B2RXF5 422 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SOCS7O14512 581 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 KRT37O76014 449 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 BEST1O76090 585 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 ENO1P06733 434 aaKnown RBP13.79□□□□□ -0.2
CASC4-202ENST00000345795 GPD2P43304 727 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SLC6A3Q01959 620 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 EFCAB3Q8N7B9 438 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 B3GALNT2Q8NCR0 500 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 AZIN2Q96A70 460 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 SMPD4Q9NXE4 827 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 FLRT1Q9NZU1 646 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 MPP6Q9NZW5 540 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 THSD7AQ9UPZ6 1657 aa13.79□□□□□ -0.2
CASC4-202ENST00000345795 IQANK1A0A1B0GTG1 560 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 B4GALT4O60513 344 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 LSM8O95777 96 aaKnown RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 CCL23P55773 120 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 MAXP61244 160 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 RPL10AP62906 217 aaKnown RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 C9orf57Q5W0N0 161 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 TRMT10BQ6PF06 316 aaKnown RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 MYLK4Q86YV6 388 aaPredicted RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 COLGALT1Q8NBJ5 622 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 GPBP1L1Q9HC44 474 aaPredicted RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 SARS2Q9NP81 518 aaKnown RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 A6NNZ2 444 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 DGKIO75912 1065 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 DARSP14868 501 aaKnown RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 PSMB4P28070 264 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 GEMIN4P57678 1058 aaKnown RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 YWHAZP63104 245 aaKnown RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 CRHR2Q13324 411 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 MPP2Q14168 576 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 TUBB8Q3ZCM7 444 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 SPATA2LQ8IUW3 424 aaPredicted RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 ZCWPW1Q9H0M4 648 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 SLC40A1Q9NP59 571 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 ITGA11Q9UKX5 1188 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 RRN3P2A6NIE6 340 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 A8MUI8 341 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 MAPK13O15264 365 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 FGFR1P11362 822 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 RGS2P41220 211 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 SCTRP47872 440 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 BCAT1P54687 386 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 KCNJ2P63252 427 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms