RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 ATAD1Q8NBU5 361 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 DBF4BQ8NFT6 615 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 CDKL2Q92772 493 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 MYLPFQ96A32 169 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 ATXN3LQ9H3M9 355 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 SMPD4Q9NXE4 827 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 GTF2IRD1Q9UHL9 959 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 TSR3Q9UJK0 312 aaKnown RBP8.98□□□□□ -0.97
SKAP2-201ENST00000345317 DCDC2CA8MYV0 355 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 FSCN2O14926 492 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 PAPSS1O43252 624 aaPredicted RBP8.98□□□□□ -0.97
SKAP2-201ENST00000345317 PMPCBO75439 489 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 ITGBL1O95965 494 aaPredicted RBP8.98□□□□□ -0.97
SKAP2-201ENST00000345317 SLC10A3P09131 477 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 SETSIPP0DME0 302 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 GPD2P43304 727 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 ACLYP53396 1101 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 PRPSAP1Q14558 356 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 LCLAT1Q6UWP7 414 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 BZW1Q7L1Q6 419 aaKnown RBP8.98□□□□□ -0.97
SKAP2-201ENST00000345317 NT5DC4Q86YG4 428 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 ZNF513Q8N8E2 541 aaPredicted RBP8.98□□□□□ -0.97
SKAP2-201ENST00000345317 CAVIN3Q969G5 261 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 LGMNQ99538 433 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 FSD1LQ9BXM9 530 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 VPS11Q9H270 941 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 SFMBT1Q9UHJ3 866 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 DCTN4Q9UJW0 460 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 G3BP2Q9UN86 482 aaKnown RBP8.98□□□□□ -0.97
SKAP2-201ENST00000345317 SLC45A1Q9Y2W3 748 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 FIS1Q9Y3D6 152 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.98□□□□□ -0.97
SKAP2-201ENST00000345317 SNX10Q9Y5X0 201 aa8.98□□□□□ -0.97
SKAP2-201ENST00000345317 hCG_1818297A0A087WSY0 165 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TMEM120BA0PK00 339 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 EIF4E1BA6NMX2 242 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 SPTLC1O15269 473 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 SMIM24O75264 130 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TRUB2O95900 331 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 JCHAINP01591 159 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 KITP10721 976 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 RARGP13631 454 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 MDH1P40925 334 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 IL9RQ01113 521 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 SETDB1Q15047 1291 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 CFAP157Q5JU67 520 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 DUPD1Q68J44 220 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 C15orf39Q6ZRI6 1047 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 RASGEF1CQ8N431 466 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 LRRC52Q8N7C0 313 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 FBXO32Q969P5 355 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 SLC40A1Q9NP59 571 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 CYTH4Q9UIA0 394 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 QSER1Q2KHR3 1735 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 CES2O00748 559 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 LIASO43766 372 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 APOEP02649 317 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TPH1P17752 444 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 LSP1P33241 339 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 HSPA9P38646 679 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 PREPLQ4J6C6 727 aaPredicted RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 SLC25A41Q8N5S1 370 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 GLIS1Q8NBF1 620 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 IPMKQ8NFU5 416 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 AGR3Q8TD06 166 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 MAGEB5Q9BZ81 275 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TKTL2Q9H0I9 626 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TRABDQ9H4I3 376 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 ETAA1Q9NY74 926 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 MCM3APO60318 1980 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TCP11X1B4DZS4 312 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 MDM4O15151 490 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 MSI1O43347 362 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 RIPK2O43353 540 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 LTFP02788 710 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 RANBP1P43487 201 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 GBE1Q04446 702 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 CA9Q16790 459 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TIGD5Q53EQ6 642 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 MROH9Q5TGP6 573 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TRIM68Q6AZZ1 485 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 PPIL6Q8IXY8 311 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 DCP1BQ8IZD4 617 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 WDTC1Q8N5D0 677 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 PCED1BQ96HM7 432 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 DDX20Q9UHI6 824 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 GOLGA4Q13439 2230 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 CITO14578 2027 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 GMNCA6NCL1 334 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 FKTNO75072 461 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 BFSP2Q13515 415 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 FYB2Q5VWT5 728 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 TRMT10CQ7L0Y3 403 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 NLRP14Q86W24 1093 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 UNC93AQ86WB7 457 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 CHSY1Q86X52 802 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 PDCD7Q8N8D1 485 aaKnown RBP8.97□□□□□ -0.97
SKAP2-201ENST00000345317 MCUQ8NE86 351 aa8.97□□□□□ -0.97
SKAP2-201ENST00000345317 FBF1Q8TES7 1133 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms