RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 LRRC1Q9BTT6 524 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 VCX3AQ9NNX9 186 aa16.95■□□□□ 0.3
SMARCA4-201ENST00000344626 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 CCL16O15467 120 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 DDHD2O94830 711 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 ARHGAP1Q07960 439 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 SZRD1Q7Z422 152 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 OOSP2Q86WS3 158 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 LGI2Q8N0V4 545 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 OXCT2Q9BYC2 517 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 SMYD3Q9H7B4 428 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 FAM237AA0A1B0GTK4 181 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 PTK2BQ14289 1009 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 DNAJC19Q96DA6 116 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 SPATA17Q96L03 361 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 TRIM51Q9BSJ1 452 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 DCTN3O75935 186 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 FGF19O95750 216 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 SERPIND1P05546 499 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 TGM2P21980 687 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 TRIM32Q13049 653 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 HABP4Q5JVS0 413 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 GDF6Q6KF10 455 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 C16orf59Q7L2K0 433 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 BTBD6Q96KE9 485 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 FAM118BQ9BPY3 351 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 CACNA1FO60840 1977 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 SMIM28A0A1B0GU29 152 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 DNM1LO00429 736 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 SGCGQ13326 291 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 RARS2Q5T160 578 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 MIR1-1HGQ9H1L0 117 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 Q9H521 79 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 ATP13A1Q9HD20 1204 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 FBXO10Q9UK96 956 aa16.94■□□□□ 0.3
SMARCA4-201ENST00000344626 ABHD14A-ACY1A0A1B0GW23 586 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 ARIH2O95376 493 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 CRTAMO95727 393 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 HDAC4P56524 1084 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 SMAD3P84022 425 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 ZSCAN26Q16670 478 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 BLOC1S5Q8TDH9 187 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 IRX2Q9BZI1 471 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 TRIM15Q9C019 465 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 ADAM28Q9UKQ2 775 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 MAFBQ9Y5Q3 323 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 BAG2O95816 211 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 OR1E1P30953 314 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 CNGA2Q16280 664 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 CST9Q5W186 159 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 SPOCD1Q6ZMY3 1216 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 CHPFQ8IZ52 775 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 TOP6BLQ8N6T0 577 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 MAB21L3Q8N8X9 362 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 STAMBPL1Q96FJ0 436 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 HSFY1Q96LI6 401 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 RIPOR3Q96MK2 946 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 PRDM16Q9HAZ2 1276 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 CSF2RAP15509 400 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 SCNN1BP51168 640 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 MCRS1Q96EZ8 462 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 Q9Y3F1 56 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 ORC6Q9Y5N6 252 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 MORC2Q9Y6X9 1032 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 GON4LQ3T8J9 2241 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 OR4Q2P0C623 313 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 NPR3P17342 541 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 HMOX2P30519 316 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 ERAP2Q6P179 960 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 SERPINA13PQ6UXR4 307 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 DEFB106AQ8N104 65 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 FGFR1OP2Q9NVK5 253 aa16.93■□□□□ 0.3
SMARCA4-201ENST00000344626 RPL17P18621 184 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 CHRM3P20309 590 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 CASP5P51878 434 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 MAGOHP61326 146 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 C11orf63Q6NUN7 778 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 PRR23CQ6ZRP0 262 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 PXYLP1Q8TE99 480 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 TBC1D13Q9NVG8 400 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 BAIAP2L1Q9UHR4 511 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 CHMP2BQ9UQN3 213 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 ARHGAP10A1A4S6 786 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 ZNF862O60290 1169 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 ESRRAP11474 423 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 POLR2EP19388 210 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 TUBP50607 506 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 ZNF669Q96BR6 464 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 KDM4CQ9H3R0 1056 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 CPSF2Q9P2I0 782 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 PSMC3IPQ9P2W1 217 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 DRG1Q9Y295 367 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 HEATR9A2RTY3 570 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 ZNF792Q3KQV3 632 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 MARC1Q5VT66 337 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 ERP44Q9BS26 406 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 DNMT3LQ9UJW3 386 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 CLCA2Q9UQC9 943 aa16.92■□□□□ 0.3
SMARCA4-201ENST00000344626 CYP2F1P24903 491 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms