RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SETDB2Q96T68 719 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TMEM120AQ9BXJ8 343 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 PDLIM1O00151 329 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ELF3P78545 371 aaPredicted RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 NRF1Q16656 503 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 HAUS6Q7Z4H7 955 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 LINC00301Q8NCQ3 95 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 SLC7A3Q8WY07 619 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 ZNF350Q9GZX5 532 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 CDH19Q9H159 772 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 UBQLN1Q9UMX0 589 aaKnown RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 DUSP12Q9UNI6 340 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 GTF2A1LQ9UNN4 478 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ERGIC3Q9Y282 383 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 COQ6Q9Y2Z9 468 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 SNX8Q9Y5X2 465 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 NCOA6Q14686 2063 aaPredicted RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 ZNF197O14709 1029 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TPST1O60507 370 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ULK1O75385 1050 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 PSMG1O95456 288 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 EPHB2P29323 1055 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 GALK1P51570 392 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 PSMD5Q16401 504 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 KRT24Q2M2I5 525 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ABCB5Q2M3G0 1257 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TBRG1Q3YBR2 411 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TBCELQ5QJ74 424 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ZNF613Q6PF04 617 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 DHFR2Q86XF0 187 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TMC2Q8TDI7 906 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 XAGE3Q8WTP9 111 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 CKAP2Q8WWK9 683 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 EYA3Q99504 573 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 APOL2Q9BQE5 337 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TCEAL7Q9BRU2 100 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 SLC39A3Q9BRY0 314 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 GPAMQ9HCL2 828 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 RPL26L1Q9UNX3 145 aaKnown RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 REXO2Q9Y3B8 237 aaKnown RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 SH3BP1Q9Y3L3 701 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 IQGAP3Q86VI3 1631 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 PGK1P00558 417 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 MYBL2P10244 700 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 YAP1P46937 504 aaKnown RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 HIRAP54198 1017 aaPredicted RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 POU4F1Q01851 419 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ATP6AP1LQ52LC2 224 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ERMARDQ5T6L9 678 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 SYCE2Q6PIF2 218 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 CRTC3Q6UUV7 619 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ENOSF1Q7L5Y1 443 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 SLCO6A1Q86UG4 719 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 PROSER1Q86XN7 944 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 CAMKK1Q8N5S9 505 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 FANCBQ8NB91 859 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 OR4C6Q8NH72 309 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ACOT12Q8WYK0 555 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TMEM237Q96Q45 408 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 C1QTNF1Q9BXJ1 281 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ARMC7Q9H6L4 198 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 THAP1Q9NVV9 213 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ARHGEF11O15085 1522 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 NR5A2O00482 541 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 RTN2O75298 545 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ITGB3P05106 788 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 ADSSP30520 456 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 NAMPTP43490 491 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 AQP5P55064 265 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 BCAR1P56945 870 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 RPL6Q02878 288 aaKnown RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 PHKG1Q16816 387 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 CNSTQ6PJW8 725 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 FAM220AQ7Z4H9 259 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 SPATA18Q8TC71 538 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 SENP7Q9BQF6 1050 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TCF7L2Q9NQB0 619 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 SH3GLB2Q9NR46 395 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 CNOT8Q9UFF9 292 aaKnown RBP6.33□□□□□ -1.4
VCAN-203ENST00000343200 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 DOCK5Q9H7D0 1870 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 F5P12259 2224 aa6.33□□□□□ -1.4
VCAN-203ENST00000343200 TRAPPC3O43617 180 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 MYL4P12829 197 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CCNE1P24864 410 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PDHA2P29803 388 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CEBPGP53567 150 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 SKIV2LQ15477 1246 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 DEF8Q6ZN54 512 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 FRMD7Q6ZUT3 714 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 OR5J2Q8NH18 312 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 TEX47Q8TBZ9 253 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 TNFAIP8L1Q8WVP5 186 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 PYDC1Q8WXC3 89 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CLP1Q92989 425 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 SP110Q9HB58 689 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 CCNB1IP1Q9NPC3 277 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 FARSBQ9NSD9 589 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms