RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 STRA8Q7Z7C7 330 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 DEFB106AQ8N104 65 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 FRMD8Q9BZ67 464 aaPredicted RBP16.91■□□□□ 0.3
RDX-201ENST00000343115 FRMD8P1Q9BZ68 369 aaPredicted RBP16.91■□□□□ 0.3
RDX-201ENST00000343115 DHX33Q9H6R0 707 aaKnown RBP16.91■□□□□ 0.3
RDX-201ENST00000343115 SUDS3Q9H7L9 328 aaPredicted RBP16.91■□□□□ 0.3
RDX-201ENST00000343115 STARD13Q9Y3M8 1113 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 NFASCO94856 1347 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 UBA6A0AVT1 1052 aaPredicted RBP16.91■□□□□ 0.3
RDX-201ENST00000343115 MT-CO1P00395 513 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 ERBB2P04626 1255 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 PAMP19021 973 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 FOXN2P32314 431 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 NSUN2Q08J23 767 aaKnown RBP eCLIP16.91■□□□□ 0.3
RDX-201ENST00000343115 TMCO4Q5TGY1 634 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 MTHFD1LQ6UB35 978 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 OXNAD1Q96HP4 312 aaPredicted RBP16.91■□□□□ 0.3
RDX-201ENST00000343115 ACSS3Q9H6R3 686 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 ATRNL1Q5VV63 1379 aa16.91■□□□□ 0.3
RDX-201ENST00000343115 CDKN2BP42772 138 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 ACADSBP45954 432 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 COPAP53621 1224 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 BCAT1P54687 386 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 FNBP1LQ5T0N5 605 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 RNF148Q8N7C7 305 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 ICA1LQ8NDH6 482 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 TTC8Q8TAM2 541 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 OPTNQ96CV9 577 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 NTPCRQ9BSD7 190 aaKnown RBP16.9■□□□□ 0.3
RDX-201ENST00000343115 FAM96AQ9H5X1 160 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 ASB7Q9H672 318 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 CHD4Q14839 1912 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
RDX-201ENST00000343115 EDF1O60869 148 aaKnown RBP16.9■□□□□ 0.3
RDX-201ENST00000343115 MTA2O94776 668 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 TRUB2O95900 331 aaKnown RBP16.9■□□□□ 0.3
RDX-201ENST00000343115 GDF10P55107 478 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 TSPY1Q01534 308 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 BST1Q10588 318 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 HSP90AA5PQ58FG0 334 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 RNF157Q96PX1 679 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 PACSIN3Q9UKS6 424 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 ZNF214Q9UL59 606 aaPredicted RBP16.9■□□□□ 0.3
RDX-201ENST00000343115 ABT1Q9ULW3 272 aaKnown RBP16.9■□□□□ 0.3
RDX-201ENST00000343115 IRS2Q9Y4H2 1338 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 KIF3CO14782 793 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 MCF2P10911 925 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 SP2Q02086 613 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
RDX-201ENST00000343115 CRYGNQ8WXF5 182 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 CPT1BQ92523 772 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 ZNF541Q9H0D2 1346 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 PDE5AO76074 875 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 B3GAT3O94766 335 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 KLHL2O95198 593 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 APOEP02649 317 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 CYP1A1P04798 512 aaPredicted RBP16.9■□□□□ 0.3
RDX-201ENST00000343115 RALBP11234 206 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 GNAT1P11488 350 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 GRIK1P39086 918 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 LRRC43Q8N309 656 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 TRIML2Q8N7C3 387 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 ELMO2Q96JJ3 720 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 BTBD10Q9BSF8 475 aa16.9■□□□□ 0.3
RDX-201ENST00000343115 N4BP2Q86UW6 1770 aaPredicted RBP16.89■□□□□ 0.3
RDX-201ENST00000343115 CYB561D2O14569 222 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 ATICP31939 592 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 NUDT2P50583 147 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 WDR4P57081 412 aaKnown RBP16.89■□□□□ 0.29
RDX-201ENST00000343115 SLC6A3Q01959 620 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 MED21Q13503 144 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 CYTH1Q15438 398 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 CYP1B1Q16678 543 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 C1orf220Q5T0J3 134 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 DNAJB3Q8WWF6 145 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 HTR3CQ8WXA8 447 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 IARS2Q9NSE4 1012 aaKnown RBP16.89■□□□□ 0.29
RDX-201ENST00000343115 ETNK2Q9NVF9 386 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 SIPA1L3O60292 1781 aaPredicted RBP16.89■□□□□ 0.29
RDX-201ENST00000343115 RNF103O00237 685 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 ERVK-10P10266 1014 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 SLC26A2P50443 739 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 ZNF143P52747 638 aaPredicted RBP16.89■□□□□ 0.29
RDX-201ENST00000343115 GRIK4Q16099 956 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 CELF3Q5SZQ8 465 aaKnown RBP16.89■□□□□ 0.29
RDX-201ENST00000343115 SH3PXD2AQ5TCZ1 1133 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 LCA5Q86VQ0 697 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 ADGRF2Q8IZF7 708 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 RFWD2Q8NHY2 731 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 STK32AQ8WU08 396 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 FGD4Q96M96 766 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 LGMNQ99538 433 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 EFHD1Q9BUP0 239 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 ATXN3LQ9H3M9 355 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 ACTL7BQ9Y614 415 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 GLRA3O75311 464 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 LGALS2P05162 132 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 ABHD2P08910 425 aa16.89■□□□□ 0.29
RDX-201ENST00000343115 GAD2Q05329 585 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms