RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 BST2Q10589 180 aaKnown RBP21.16■□□□□ 0.98
SYNE2-201ENST00000341472 EFEMP1Q12805 493 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 PUM1Q14671 1186 aaKnown RBP eCLIP21.16■□□□□ 0.98
SYNE2-201ENST00000341472 LCLAT1Q6UWP7 414 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 TPGS1Q6ZTW0 290 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 RSRC2Q7L4I2 434 aaKnown RBP21.16■□□□□ 0.98
SYNE2-201ENST00000341472 RRAGAQ7L523 313 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 ALLCQ8N6M5 410 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 KCNV2Q8TDN2 545 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 LOXL4Q96JB6 756 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 XPO6Q96QU8 1125 aaKnown RBP21.16■□□□□ 0.98
SYNE2-201ENST00000341472 BBS2Q9BXC9 721 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 ULBP1Q9BZM6 244 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 DCLK3Q9C098 648 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 RASAL2Q9UJF2 1139 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 STRIP2Q9ULQ0 834 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 ZNF510Q9Y2H8 683 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 CEP250Q9BV73 2442 aa21.16■□□□□ 0.98
SYNE2-201ENST00000341472 KIF26AQ9ULI4 1882 aaPredicted RBP21.15■□□□□ 0.98
SYNE2-201ENST00000341472 STC2O76061 302 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 SDHBP21912 280 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 KIR2DL1P43626 348 aaPredicted RBP21.15■□□□□ 0.98
SYNE2-201ENST00000341472 CNGA2Q16280 664 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 CRY1Q16526 586 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 RSPO4Q2I0M5 234 aaPredicted RBP21.15■□□□□ 0.98
SYNE2-201ENST00000341472 EOGTQ5NDL2 527 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 KBTBD6Q86V97 674 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 PHTF2Q8N3S3 785 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 IL17RCQ8NAC3 791 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 TXNDC5Q8NBS9 432 aaKnown RBP21.15■□□□□ 0.98
SYNE2-201ENST00000341472 TFAP2BQ92481 460 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 NDRG1Q92597 394 aaKnown RBP21.15■□□□□ 0.98
SYNE2-201ENST00000341472 KAT5Q92993 513 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 MARCH2Q9P0N8 246 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 RWDD2AQ9UIY3 292 aa21.15■□□□□ 0.98
SYNE2-201ENST00000341472 NEDD8-MDP1E9PL57 170 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 RNF225M0QZC1 329 aaPredicted RBP21.14■□□□□ 0.97
SYNE2-201ENST00000341472 ALDH1A2O94788 518 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 KLKB1P03952 638 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 HMBSP08397 361 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 SETSIPP0DME0 302 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 TYRP14679 529 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 FOXK2Q01167 660 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 USP39Q53GS9 565 aaKnown RBP21.14■□□□□ 0.97
SYNE2-201ENST00000341472 GRAMD4Q6IC98 578 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 Q6ZNB5 142 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 ERMP1Q7Z2K6 904 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 CREBRFQ8IUR6 639 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 KCTD13Q8WZ19 329 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 ZC3H10Q96K80 434 aaKnown RBP21.14■□□□□ 0.97
SYNE2-201ENST00000341472 SEMA4GQ9NTN9 838 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 DNAJC17Q9NVM6 304 aaKnown RBP21.14■□□□□ 0.97
SYNE2-201ENST00000341472 DLL3Q9NYJ7 618 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 MARK1Q9P0L2 795 aa21.14■□□□□ 0.97
SYNE2-201ENST00000341472 SLC12A8A0AV02 714 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 SGK1O00141 431 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 TRIM24O15164 1050 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 GCNT1Q02742 428 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 STILQ15468 1287 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 CSRP2Q16527 193 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 PKDCCQ504Y2 493 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 ANO7Q6IWH7 933 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 TMEM92Q6UXU6 159 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 ARHGEF19Q8IW93 802 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 SIX6OS1Q8N1H7 587 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 TERB1Q8NA31 727 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 MLKLQ8NB16 471 aa21.13■□□□□ 0.97
SYNE2-201ENST00000341472 INTS2Q9H0H0 1204 aaKnown RBP21.13■□□□□ 0.97
SYNE2-201ENST00000341472 POLMQ9NP87 494 aaPredicted RBP21.13■□□□□ 0.97
SYNE2-201ENST00000341472 DCLK1O15075 740 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 CACNG3O60359 315 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 RHOBTB1O94844 696 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 CHRM1P11229 460 aaPredicted RBP21.12■□□□□ 0.97
SYNE2-201ENST00000341472 CHKAP35790 457 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 ADIGQ0VDE8 80 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 PLK5Q496M5 336 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 C10orf76Q5T2E6 689 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 BSPRYQ5W0U4 402 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 DGLUCYQ7Z3D6 616 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 TRMT11Q7Z4G4 463 aaKnown RBP21.12■□□□□ 0.97
SYNE2-201ENST00000341472 RASSF3Q86WH2 238 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 RBBP8NLQ8NC74 664 aaPredicted RBP21.12■□□□□ 0.97
SYNE2-201ENST00000341472 RNF139Q8WU17 664 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 SLC35F5Q8WV83 523 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 CNOT6LQ96LI5 555 aaKnown RBP21.12■□□□□ 0.97
SYNE2-201ENST00000341472 ARRDC1-AS1Q9H2J1 176 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 CNGB3Q9NQW8 809 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 INVSQ9Y283 1065 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 STARD13Q9Y3M8 1113 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 SDK1Q7Z5N4 2213 aa21.12■□□□□ 0.97
SYNE2-201ENST00000341472 FOXD2O60548 495 aaPredicted RBP21.11■□□□□ 0.97
SYNE2-201ENST00000341472 LCP1P13796 627 aa21.11■□□□□ 0.97
SYNE2-201ENST00000341472 HNRNPLP14866 589 aaKnown RBP eCLIP21.11■□□□□ 0.97
SYNE2-201ENST00000341472 BRD2P25440 801 aaKnown RBP21.11■□□□□ 0.97
SYNE2-201ENST00000341472 CORO1AP31146 461 aaKnown RBP21.11■□□□□ 0.97
SYNE2-201ENST00000341472 ELF2Q15723 593 aa21.11■□□□□ 0.97
SYNE2-201ENST00000341472 BHLHA9Q7RTU4 235 aa21.11■□□□□ 0.97
SYNE2-201ENST00000341472 C11orf74Q86VG3 221 aa21.11■□□□□ 0.97
SYNE2-201ENST00000341472 BHMTQ93088 406 aa21.11■□□□□ 0.97
SYNE2-201ENST00000341472 KREMEN1Q96MU8 473 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms