RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 NR1H3Q13133 447 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 SUPT20HL1Q3ZLR7 823 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 ITPRIPL1Q6GPH6 555 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 H2AFVQ71UI9 128 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 SPERTQ8NA61 448 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 BORCS5Q969J3 196 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 ATP8B3O60423 1300 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 C2orf71A6NGG8 1288 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 AOC2O75106 756 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 SULT1C4O75897 302 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 SERPINB6P35237 376 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 CYP2J2P51589 502 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 GPC3P51654 580 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 SLC18A1P54219 525 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 NUP107P57740 925 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 WASHC5Q12768 1159 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 TRIP10Q15642 601 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 SIGIRRQ6IA17 410 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 RFPL4BQ6ZWI9 263 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 AMIGO2Q86SJ2 522 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 VSIG10LQ86VR7 867 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 GRAMD2AQ8IUY3 354 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 KLC2Q9H0B6 622 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 ELP3Q9H9T3 547 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 TBC1D22BQ9NU19 505 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 MAP3K20Q9NYL2 800 aaKnown RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 IGSF9BQ9UPX0 1349 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 K7ENM7 598 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 FCHO1O14526 889 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 CASQ2O14958 399 aaPredicted RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 GCAP28676 217 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 KCNJ1P48048 391 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 SOX10P56693 466 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 FOXD4Q12950 439 aaPredicted RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 CYP2A13Q16696 494 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 ZNF829Q3KNS6 432 aaPredicted RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 FAM91A1Q658Y4 838 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 KYAT3Q6YP21 454 aaKnown RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 USP43Q70EL4 1123 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 LPCAT2Q7L5N7 544 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 FRMD5Q7Z6J6 570 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 C4orf33Q8N1A6 199 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 GALNT4Q8N4A0 578 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 ZNF276Q8N554 614 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 KCTD17Q8N5Z5 321 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 CPSF7Q8N684 471 aaKnown RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 PCYOX1LQ8NBM8 494 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 OR7G1Q8NGA0 311 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 MORC4Q8TE76 937 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 SLC35C1Q96A29 364 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 SGF29Q96ES7 293 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 TMEM120AQ9BXJ8 343 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 UNKQ9C0B0 810 aaKnown RBP12.28□□□□□ -0.44
RTN3-203ENST00000341307 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 SACM1LQ9NTJ5 587 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 SEL1LQ9UBV2 794 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 TCEAL9Q9UHQ7 104 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 ERVK-11Q9UQG0 969 aa12.28□□□□□ -0.44
RTN3-203ENST00000341307 EMSYQ7Z589 1322 aa12.27□□□□□ -0.44
RTN3-203ENST00000341307 THAP12O43422 761 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 PEX1O43933 1283 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 GUCY1B2O75343 617 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 TUBA4AP68366 448 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 ZBTB16Q05516 673 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 CALCOCO2Q13137 446 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 EGFLAMQ63HQ2 1017 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 DPY19L2P1Q6NXN4 242 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 GJB7Q6PEY0 223 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 CPNE9Q8IYJ1 553 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 GOLM1Q8NBJ4 401 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 PWWP2AQ96N64 755 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 RBM15Q96T37 977 aaKnown RBP eCLIP12.27□□□□□ -0.454e-7■■■□□ 16.7
RTN3-203ENST00000341307 NMUR2Q9GZQ4 415 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 R3HDMLQ9H3Y0 253 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 TRABDQ9H4I3 376 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 AASDHPPTQ9NRN7 309 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 AJAP1Q9UKB5 411 aaPredicted RBP12.27□□□□□ -0.45
RTN3-203ENST00000341307 DOCK5Q9H7D0 1870 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 TCRBV7S2A1N4TA0A589 114 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 A6NL46 340 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 CAPN14A8MX76 684 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 EIF3DO15371 548 aaKnown RBP eCLIP12.27□□□□□ -0.45
RTN3-203ENST00000341307 S100BP04271 92 aaPredicted RBP12.27□□□□□ -0.45
RTN3-203ENST00000341307 INHBBP09529 407 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 POLR2EP19388 210 aaKnown RBP12.27□□□□□ -0.45
RTN3-203ENST00000341307 CCND2P30279 289 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 COILP38432 576 aaPredicted RBP12.27□□□□□ -0.45
RTN3-203ENST00000341307 ACADSBP45954 432 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 PCYT1AP49585 367 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.45
RTN3-203ENST00000341307 GALCP54803 685 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 C21orf59P57076 290 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 ARHGEF6Q15052 776 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 DEFB115Q30KQ5 88 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms