RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 NPNTQ6UXI9 565 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 ZCCHC23Q6ZST2 131 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 EEPD1Q7L9B9 569 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 SPATA24Q86W54 205 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 CATSPER1Q8NEC5 780 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 NLRP7Q8WX94 980 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 PTCD3Q96EY7 689 aaKnown RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 SCYL1Q96KG9 808 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 TRIM56Q9BRZ2 755 aaKnown RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 LHX5Q9H2C1 402 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 GBA2Q9HCG7 927 aaPredicted RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 MYOZ2Q9NPC6 264 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 EPS15L1Q9UBC2 864 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 G3BP2Q9UN86 482 aaKnown RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 GOLGA8QA0A0J9YX86 632 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 GOLGA8OA6NCC3 632 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 MEI4A8MW99 385 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 GOLGA8NF8WBI6 632 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 CFLARO15519 480 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 DLDP09622 509 aaKnown RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 KCNA2P16389 499 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 AMPD1P23109 780 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 RBL1P28749 1068 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 RAP1GDS1P52306 607 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ART3Q13508 389 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ABHD15Q6UXT9 468 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 RSPH3Q86UC2 560 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 AFAP1L2Q8N4X5 818 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 POU5F2Q8N7G0 328 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 DNAAF3Q8N9W5 541 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ANKLE1Q8NAG6 615 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 AGBL3Q8NEM8 1001 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 CLMNQ96JQ2 1002 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 DDX50Q9BQ39 737 aaKnown RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 SHCBP1LQ9BZQ2 653 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 SUDS3Q9H7L9 328 aaPredicted RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 NRDE2Q9H7Z3 1164 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 GPATCH2LQ9NWQ4 482 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 DCDC2Q9UHG0 476 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 TLK1Q9UKI8 766 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 DTNAQ9Y4J8 743 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 COL24A1Q17RW2 1714 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 TCRBV7S3A2A0A539 114 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 PRR5-ARHGAP8B1AHC4 643 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 GAS2O43903 313 aaKnown RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 AVILO75366 819 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 PIGRP01833 764 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 SERPINE1P05121 402 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ARHGAP8P85298 464 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 PLEKHG4Q58EX7 1191 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 C7orf31Q8N865 590 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF784Q8NCA9 323 aaPredicted RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 FAM149B1Q96BN6 582 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 TMEM176AQ96HP8 235 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 VPS33BQ9H267 617 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 DMAP1Q9NPF5 467 aaPredicted RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ETNK2Q9NVF9 386 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 HBS1LQ9Y450 684 aaKnown RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ARFGEF1Q9Y6D6 1849 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 BPGMP07738 259 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 MYL4P12829 197 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 RPS12P25398 132 aaKnown RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 TNFSF9P41273 254 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 NEK3P51956 506 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 MMRN1Q13201 1228 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ACAD11Q709F0 780 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 RAPH1Q70E73 1250 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 DHDDSQ86SQ9 333 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 NCAPG2Q86XI2 1143 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 CCNJLQ8IV13 435 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 CCDC33Q8N5R6 958 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 OR6Y1Q8NGX8 325 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 TFAP2BQ92481 460 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 RNF157Q96PX1 679 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 TBCBQ99426 244 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 STN1Q9H668 368 aaKnown RBP9.75□□□□□ -0.85
TRERF1-201ENST00000340840 CYP3A43Q9HB55 503 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 DNAJB4Q9UDY4 337 aa9.75□□□□□ -0.85
TRERF1-201ENST00000340840 ARHGAP10A1A4S6 786 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 EME2A4GXA9 379 aaPredicted RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 F5H423 210 aaPredicted RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 PFDN1O60925 122 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CD48P09326 243 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 PHKA2P46019 1235 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 SLC1A6P48664 564 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF143P52747 638 aaPredicted RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CDH8P55286 799 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 ACTR3P61158 418 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 YWHAZP63104 245 aaKnown RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CAPSQ13938 189 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 N4BP2L1Q5TBK1 243 aaPredicted RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 MARK2Q7KZI7 788 aaKnown RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 PYDC1Q8WXC3 89 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CLPTM1LQ96KA5 538 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 NAT9Q9BTE0 207 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 NT5C1AQ9BXI3 368 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 STYXL1Q9Y6J8 313 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 FAM155BO75949 473 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 MICAL2O94851 1124 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms