RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CACNA2D4Q7Z3S7 1137 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 MSANTD4Q8NCY6 345 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 NDRG1Q92597 394 aaKnown RBP20.09■□□□□ 0.81
SYNE4-202ENST00000340477 CLDN23Q96B33 292 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 FAM149B1Q96BN6 582 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 P2RY13Q9BPV8 354 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 SLC4A5Q9BY07 1137 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 LHX5Q9H2C1 402 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 LMAN1LQ9HAT1 526 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 CBX8Q9HC52 389 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 NLRC4Q9NPP4 1024 aa20.09■□□□□ 0.81
SYNE4-202ENST00000340477 SPATA6Q9NWH7 488 aaPredicted RBP20.09■□□□□ 0.81
SYNE4-202ENST00000340477 SLC12A8A0AV02 714 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 CYP17A1P05093 508 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 ADH5P11766 374 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 CYP11B1P15538 503 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 STAT1P42224 750 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 IQCB1Q15051 598 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 DHCR24Q15392 516 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 TXNDC11Q6PKC3 985 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 HTR3DQ70Z44 454 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 FMNL3Q8IVF7 1028 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 BBS7Q8IWZ6 715 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 TMEM35BQ8NCS4 154 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 EDEM1Q92611 657 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 CD101Q93033 1021 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 PLD4Q96BZ4 506 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 PPP1R13BQ96KQ4 1090 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 DLGAP2Q9P1A6 1054 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 RAPGEFL1Q9UHV5 662 aa20.08■□□□□ 0.81
SYNE4-202ENST00000340477 MUC6Q6W4X9 2439 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 OTOL1A6NHN0 477 aaPredicted RBP20.07■□□□□ 0.8
SYNE4-202ENST00000340477 E5RJQ4 531 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 CAPN9O14815 690 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 GFPT2O94808 682 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 HMBSP08397 361 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 DRD1P21728 446 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 SOX5P35711 763 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 RPL34P49207 117 aaKnown RBP20.07■□□□□ 0.8
SYNE4-202ENST00000340477 GAD2Q05329 585 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 PPP2R5DQ14738 602 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 BHLHA9Q7RTU4 235 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 ZNF677Q86XU0 584 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 SCUBE3Q8IX30 993 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 ADGRG2Q8IZP9 1017 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 SYNPOQ8N3V7 929 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 C1orf131Q8NDD1 294 aaKnown RBP20.07■□□□□ 0.8
SYNE4-202ENST00000340477 PRSS33Q8NF86 280 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 CCDC26Q8TAB7 109 aa20.07■□□□□ 0.8
SYNE4-202ENST00000340477 HBS1LQ9Y450 684 aaKnown RBP20.07■□□□□ 0.8
SYNE4-202ENST00000340477 SHISA7A6NL88 538 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.06■□□□□ 0.8
SYNE4-202ENST00000340477 TRDMT1O14717 391 aaKnown RBP20.06■□□□□ 0.8
SYNE4-202ENST00000340477 LAMTOR5O43504 91 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 STC2O76061 302 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 LSM8O95777 96 aaKnown RBP20.06■□□□□ 0.8
SYNE4-202ENST00000340477 CCDC172P0C7W6 258 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 NCAM1P13591 858 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 CORO1AP31146 461 aaKnown RBP20.06■□□□□ 0.8
SYNE4-202ENST00000340477 HARS2P49590 506 aaKnown RBP20.06■□□□□ 0.8
SYNE4-202ENST00000340477 ANGPT1Q15389 498 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 ANO4Q32M45 955 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 PREPLQ4J6C6 727 aaPredicted RBP20.06■□□□□ 0.8
SYNE4-202ENST00000340477 TAF3Q5VWG9 929 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 TOGARAM2Q6ZUX3 1019 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 APTXQ7Z2E3 356 aaKnown RBP20.06■□□□□ 0.8
SYNE4-202ENST00000340477 TMEM110Q86TL2 294 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 LUZP1Q86V48 1076 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 C1orf210Q8IVY1 113 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 CLEC4CQ8WTT0 213 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 CHRDQ9H2X0 955 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
SYNE4-202ENST00000340477 SPHK2Q9NRA0 654 aa20.06■□□□□ 0.8
SYNE4-202ENST00000340477 CHRNB1P11230 501 aa20.05■□□□□ 0.8
SYNE4-202ENST00000340477 JAM2P57087 298 aa20.05■□□□□ 0.8
SYNE4-202ENST00000340477 NFKBIBQ15653 356 aa20.05■□□□□ 0.8
SYNE4-202ENST00000340477 TMEM196Q5HYL7 178 aa20.05■□□□□ 0.8
SYNE4-202ENST00000340477 LY6G5CQ5SRR4 150 aa20.05■□□□□ 0.8
SYNE4-202ENST00000340477 MSANTD2Q6P1R3 559 aa20.05■□□□□ 0.8
SYNE4-202ENST00000340477 CYTH4Q9UIA0 394 aa20.05■□□□□ 0.8
SYNE4-202ENST00000340477 EPHB6O15197 1021 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 PAPSS1O43252 624 aaPredicted RBP20.04■□□□□ 0.8
SYNE4-202ENST00000340477 GABBR2O75899 941 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 CHKAP35790 457 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 EIF2DP41214 584 aaKnown RBP20.04■□□□□ 0.8
SYNE4-202ENST00000340477 CCINQ13939 588 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 FBXO43Q4G163 708 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 EFHC1Q5JVL4 640 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 RHBDF2Q6PJF5 856 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 NUDT18Q6ZVK8 323 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 ZDHHC17Q8IUH5 632 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 ZNF687Q8N1G0 1237 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 EPS8L1Q8TE68 723 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 ATOH1Q92858 354 aaPredicted RBP20.04■□□□□ 0.8
SYNE4-202ENST00000340477 SERPINB11Q96P15 392 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 CPXM1Q96SM3 734 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 TSPY26PQ9H489 355 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 POPDC2Q9HBU9 364 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 WDR35Q9P2L0 1181 aa20.04■□□□□ 0.8
SYNE4-202ENST00000340477 SFMBT1Q9UHJ3 866 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms