RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 DUPD1Q68J44 220 aa15.18■□□□□ 0.02
RET-201ENST00000340058 MTDHQ86UE4 582 aaKnown RBP15.18■□□□□ 0.02
RET-201ENST00000340058 C1orf127Q8N9H9 656 aa15.18■□□□□ 0.02
RET-201ENST00000340058 LGMNQ99538 433 aa15.18■□□□□ 0.02
RET-201ENST00000340058 CATSPERBQ9H7T0 1116 aa15.18■□□□□ 0.02
RET-201ENST00000340058 RGPD1P0DJD0 1748 aa15.18■□□□□ 0.02
RET-201ENST00000340058 PAEPP09466 180 aa15.18■□□□□ 0.02
RET-201ENST00000340058 MYL2P10916 166 aa15.18■□□□□ 0.02
RET-201ENST00000340058 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.02
RET-201ENST00000340058 BRCC3P46736 316 aa15.18■□□□□ 0.02
RET-201ENST00000340058 PRPF39Q86UA1 669 aaKnown RBP15.18■□□□□ 0.02
RET-201ENST00000340058 MTG1Q9BT17 334 aaPredicted RBP15.18■□□□□ 0.02
RET-201ENST00000340058 FICDQ9BVA6 458 aa15.18■□□□□ 0.02
RET-201ENST00000340058 ANLNQ9NQW6 1124 aa15.18■□□□□ 0.02
RET-201ENST00000340058 RBPJLQ9UBG7 517 aa15.18■□□□□ 0.02
RET-201ENST00000340058 NT5C1B-RDH14C9J2C7 533 aa15.17■□□□□ 0.02
RET-201ENST00000340058 KIF3CO14782 793 aa15.17■□□□□ 0.02
RET-201ENST00000340058 C4BPAP04003 597 aaKnown RBP15.17■□□□□ 0.02
RET-201ENST00000340058 KCNA4P22459 653 aa15.17■□□□□ 0.02
RET-201ENST00000340058 NAPEPLDQ6IQ20 393 aa15.17■□□□□ 0.02
RET-201ENST00000340058 UNC45BQ8IWX7 931 aa15.17■□□□□ 0.02
RET-201ENST00000340058 PLEKHO2Q8TD55 490 aa15.17■□□□□ 0.02
RET-201ENST00000340058 GIPC2Q8TF65 315 aa15.17■□□□□ 0.02
RET-201ENST00000340058 ERLEC1Q96DZ1 483 aa15.17■□□□□ 0.02
RET-201ENST00000340058 SPATA17Q96L03 361 aa15.17■□□□□ 0.02
RET-201ENST00000340058 GMLQ99445 158 aa15.17■□□□□ 0.02
RET-201ENST00000340058 UTP6Q9NYH9 597 aaKnown RBP15.17■□□□□ 0.02
RET-201ENST00000340058 PTPN1P18031 435 aaKnown RBP15.17■□□□□ 0.02
RET-201ENST00000340058 AARSP49588 968 aaKnown RBP eCLIP15.17■□□□□ 0.02
RET-201ENST00000340058 POLE2P56282 527 aa15.17■□□□□ 0.02
RET-201ENST00000340058 PDAP1Q13442 181 aaKnown RBP15.17■□□□□ 0.02
RET-201ENST00000340058 TTC27Q6P3X3 843 aa15.17■□□□□ 0.02
RET-201ENST00000340058 PLPPR4Q7Z2D5 763 aa15.17■□□□□ 0.02
RET-201ENST00000340058 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
RET-201ENST00000340058 OLA1Q9NTK5 396 aaKnown RBP15.17■□□□□ 0.02
RET-201ENST00000340058 SHOC2Q9UQ13 582 aa15.17■□□□□ 0.02
RET-201ENST00000340058 ABCC6O95255 1503 aa15.17■□□□□ 0.02
RET-201ENST00000340058 NCANO14594 1321 aa15.17■□□□□ 0.02
RET-201ENST00000340058 CCDC22O60826 627 aa15.17■□□□□ 0.02
RET-201ENST00000340058 ZWINTO95229 277 aa15.17■□□□□ 0.02
RET-201ENST00000340058 CKMP06732 381 aa15.17■□□□□ 0.02
RET-201ENST00000340058 SETSIPP0DME0 302 aa15.17■□□□□ 0.02
RET-201ENST00000340058 CHRNB2P17787 502 aa15.17■□□□□ 0.02
RET-201ENST00000340058 MMP8P22894 467 aa15.17■□□□□ 0.02
RET-201ENST00000340058 DPYSL3Q14195 570 aa15.17■□□□□ 0.02
RET-201ENST00000340058 SLC26A11Q86WA9 606 aa15.17■□□□□ 0.02
RET-201ENST00000340058 LRRC57Q8N9N7 239 aa15.17■□□□□ 0.02
RET-201ENST00000340058 EIF2AQ9BY44 585 aaKnown RBP15.17■□□□□ 0.02
RET-201ENST00000340058 TKTL2Q9H0I9 626 aa15.17■□□□□ 0.02
RET-201ENST00000340058 ARMCX1Q9P291 453 aa15.17■□□□□ 0.02
RET-201ENST00000340058 RBAK-RBAKDNI3L0D1 243 aa15.16■□□□□ 0.02
RET-201ENST00000340058 ATP5HO75947 161 aa15.16■□□□□ 0.02
RET-201ENST00000340058 SERPINB9P50453 376 aa15.16■□□□□ 0.02
RET-201ENST00000340058 NRLP54845 237 aa15.16■□□□□ 0.02
RET-201ENST00000340058 ZNF280AP59817 542 aaPredicted RBP15.16■□□□□ 0.02
RET-201ENST00000340058 AUHQ13825 339 aaKnown RBP15.16■□□□□ 0.02
RET-201ENST00000340058 SLC39A12Q504Y0 691 aa15.16■□□□□ 0.02
RET-201ENST00000340058 TAF2Q6P1X5 1199 aa15.16■□□□□ 0.02
RET-201ENST00000340058 PTAR1Q7Z6K3 402 aaPredicted RBP15.16■□□□□ 0.02
RET-201ENST00000340058 HTR3CQ8WXA8 447 aa15.16■□□□□ 0.02
RET-201ENST00000340058 TRIM62Q9BVG3 475 aa15.16■□□□□ 0.02
RET-201ENST00000340058 PTPRHQ9HD43 1115 aa15.16■□□□□ 0.02
RET-201ENST00000340058 STOML1Q9UBI4 398 aa15.16■□□□□ 0.02
RET-201ENST00000340058 VANGL2Q9ULK5 521 aa15.16■□□□□ 0.02
RET-201ENST00000340058 ST3GAL5Q9UNP4 418 aa15.16■□□□□ 0.02
RET-201ENST00000340058 VIRMAQ69YN4 1812 aaKnown RBP15.16■□□□□ 0.02
RET-201ENST00000340058 NCF1BA6NI72 391 aaPredicted RBP15.16■□□□□ 0.02
RET-201ENST00000340058 NCF1CA8MVU1 366 aaPredicted RBP15.16■□□□□ 0.02
RET-201ENST00000340058 DDX3YO15523 660 aaKnown RBP15.16■□□□□ 0.02
RET-201ENST00000340058 LIASO43766 372 aa15.16■□□□□ 0.02
RET-201ENST00000340058 SMIM24O75264 130 aa15.16■□□□□ 0.02
RET-201ENST00000340058 CD48P09326 243 aa15.16■□□□□ 0.02
RET-201ENST00000340058 NCF1P14598 390 aaPredicted RBP15.16■□□□□ 0.02
RET-201ENST00000340058 CHRM3P20309 590 aa15.16■□□□□ 0.02
RET-201ENST00000340058 SCTRP47872 440 aa15.16■□□□□ 0.02
RET-201ENST00000340058 HARS2P49590 506 aaKnown RBP15.16■□□□□ 0.02
RET-201ENST00000340058 NME5P56597 212 aa15.16■□□□□ 0.02
RET-201ENST00000340058 ZRANB3Q5FWF4 1079 aa15.16■□□□□ 0.02
RET-201ENST00000340058 SZRD1Q7Z422 152 aa15.16■□□□□ 0.02
RET-201ENST00000340058 SERPINI1Q99574 410 aa15.16■□□□□ 0.02
RET-201ENST00000340058 C12orf65Q9H3J6 166 aaKnown RBP15.16■□□□□ 0.02
RET-201ENST00000340058 SLCO1B3Q9NPD5 702 aa15.16■□□□□ 0.02
RET-201ENST00000340058 ADGRA2Q96PE1 1338 aa15.16■□□□□ 0.02
RET-201ENST00000340058 COL14A1Q05707 1796 aaKnown RBP15.16■□□□□ 0.02
RET-201ENST00000340058 DPYSL4O14531 572 aa15.16■□□□□ 0.02
RET-201ENST00000340058 GSTA4O15217 222 aa15.16■□□□□ 0.02
RET-201ENST00000340058 GOT1P17174 413 aa15.16■□□□□ 0.02
RET-201ENST00000340058 HNRNPH1P31943 449 aaKnown RBP15.16■□□□□ 0.02
RET-201ENST00000340058 LHX1P48742 406 aa15.16■□□□□ 0.02
RET-201ENST00000340058 KRT80Q6KB66 452 aa15.16■□□□□ 0.02
RET-201ENST00000340058 IQCKQ8N0W5 287 aa15.16■□□□□ 0.02
RET-201ENST00000340058 ZNF516Q92618 1163 aa15.16■□□□□ 0.02
RET-201ENST00000340058 LMCD1Q9NZU5 365 aa15.16■□□□□ 0.02
RET-201ENST00000340058 NR2E3Q9Y5X4 410 aa15.16■□□□□ 0.02
RET-201ENST00000340058 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.15■□□□□ 0.02
RET-201ENST00000340058 APOC4-APOC2K7ER74 178 aa15.15■□□□□ 0.02
RET-201ENST00000340058 SPAG6O75602 509 aa15.15■□□□□ 0.02
RET-201ENST00000340058 APOC2P02655 101 aa15.15■□□□□ 0.02
RET-201ENST00000340058 ERBB2P04626 1255 aa15.15■□□□□ 0.02
RET-201ENST00000340058 AQP5P55064 265 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms