RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 KCNT1Q5JUK3 1230 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 SNX30Q5VWJ9 437 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 PPP2R2DQ66LE6 453 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 SPATA31D4Q6ZUB0 917 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 ANKS1BQ7Z6G8 1248 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 LRRN4CLQ8ND94 238 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 DQX1Q8TE96 717 aaKnown RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 FBXO32Q969P5 355 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 PSMG2Q969U7 264 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 CARD6Q9BX69 1037 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 WDR6Q9NNW5 1121 aaKnown RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 PIGVQ9NUD9 493 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 DDX56Q9NY93 547 aaKnown RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 SMARCAL1Q9NZC9 954 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 PCSK1NQ9UHG2 260 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 DENND4CQ5VZ89 1909 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 C3orf70A6NLC5 250 aaPredicted RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 PRPSAP2O60256 369 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 ZRANB2O95218 330 aaKnown RBP eCLIP8.16□□□□□ -1.1
TMC1-202ENST00000340019 GLUD1P00367 558 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 RARAP10276 462 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 ARSEP51690 589 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 PLD1Q13393 1074 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 TAZQ16635 292 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 SMTNL2Q2TAL5 461 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 BTBD8Q5XKL5 378 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 MSANTD2Q6P1R3 559 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 ZNF276Q8N554 614 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 CEP112Q8N8E3 955 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 SLC7A14Q8TBB6 771 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 MICAL1Q8TDZ2 1067 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 TEKT4Q8WW24 435 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 OVCA2Q8WZ82 227 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 RAPGEF5Q92565 580 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 ACSF2Q96CM8 615 aaPredicted RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 SMOC2Q9H3U7 446 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 ZWILCHQ9H900 591 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 CERS4Q9HA82 394 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 TLR8Q9NR97 1041 aaKnown RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
TMC1-202ENST00000340019 SZT2Q5T011 3432 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 MDM4O15151 490 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 CLASP2O75122 1294 aaKnown RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 CSPG5O95196 566 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 SLU7O95391 586 aaKnown RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 ITIH3Q06033 890 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 CKAP4Q07065 602 aaKnown RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 BOLA3Q53S33 107 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 RTL10Q7L3V2 364 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 DNAJB7Q7Z6W7 309 aaPredicted RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 TAC4Q86UU9 113 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 RCOR2Q8IZ40 523 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 CCDC185Q8N715 623 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 KREMEN2Q8NCW0 462 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 ADAM32Q8TC27 787 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 FAM71BQ8TC56 605 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 SLITRK1Q96PX8 696 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 LMAN2LQ9H0V9 348 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 KLHL11Q9NVR0 708 aa8.16□□□□□ -1.1
TMC1-202ENST00000340019 MAGED2Q9UNF1 606 aaPredicted RBP8.16□□□□□ -1.1
TMC1-202ENST00000340019 EPOPA6NHQ4 379 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 PGRMC1O00264 195 aaKnown RBP8.15□□□□□ -1.1
TMC1-202ENST00000340019 TADA3O75528 432 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 F9P00740 461 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 FGGP02679 453 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 C8AP07357 584 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 PTPN7P35236 360 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 GJC1P36383 396 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 CXCR3P49682 368 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 EPHB3P54753 998 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 DEUP1Q05D60 604 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 NME3Q13232 169 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 VEPH1Q14D04 833 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 SCYL2Q6P3W7 929 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 CCDC149Q6ZUS6 474 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 FAM131BQ86XD5 332 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 PDZD8Q8NEN9 1154 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 SPATA4Q8NEY3 305 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 SLC22A17Q8WUG5 538 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 ARNTL2Q8WYA1 636 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 CASP10Q92851 521 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 RBM41Q96IZ5 413 aaKnown RBP8.15□□□□□ -1.1
TMC1-202ENST00000340019 HERPUD2Q9BSE4 406 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 SNRNP25Q9BV90 132 aaKnown RBP8.15□□□□□ -1.1
TMC1-202ENST00000340019 SLC28A3Q9HAS3 691 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 DDIT4Q9NX09 232 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 ASB3Q9Y575 518 aa8.15□□□□□ -1.1
TMC1-202ENST00000340019 ZNF840PA6NDX5 716 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 I6L893 689 aaPredicted RBP8.15□□□□□ -1.11
TMC1-202ENST00000340019 IRAK2O43187 625 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 KRT1P04264 644 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 CD48P09326 243 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 RARGP13631 454 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 KDELR1P24390 212 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 CDKN2BP42772 138 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 PAFAH1B1P43034 410 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 COPS2P61201 443 aa8.15□□□□□ -1.11
TMC1-202ENST00000340019 SMAD3P84022 425 aaKnown RBP8.15□□□□□ -1.11
TMC1-202ENST00000340019 KLF1Q13351 362 aaPredicted RBP8.15□□□□□ -1.11
TMC1-202ENST00000340019 DPYSL2Q16555 572 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms