RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 AGAP3Q96P47 875 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
SCARB1-202ENST00000339570 USP12O75317 370 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 STAT5BP51692 787 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 ZNF132P52740 706 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 SLC18A1P54219 525 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 CXCL9Q07325 125 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 N4BP2L1Q5TBK1 243 aaPredicted RBP16.71■□□□□ 0.27
SCARB1-202ENST00000339570 TRNP1Q6NT89 227 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 CPB2Q96IY4 423 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 GCNAQ96QF7 691 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 DHRS4Q9BTZ2 278 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 ELOVL4Q9GZR5 314 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 CLIC5Q9NZA1 410 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.26
SCARB1-202ENST00000339570 ADCY3O60266 1144 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 RFPL1O75677 317 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 TCN1P20061 433 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 TCF7P36402 384 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 AQP4P55087 323 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 OCRLQ01968 901 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 SFT2D3Q587I9 215 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 DPY19L2Q6NUT2 758 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 DEFB107AQ8IZN7 70 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 STKLD1Q8NE28 680 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 MRPL4Q9BYD3 311 aaKnown RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 HBS1LQ9Y450 684 aaKnown RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 H0YCG3 227 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 GOLGA8TH3BQL2 631 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 DCXO43602 365 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 HCRTO43612 131 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 ATP6V1B1P15313 513 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 EIF4BP23588 611 aaKnown RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 CCNFP41002 786 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 RANBP1P43487 201 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 CLDN10P78369 228 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 LBRQ14739 615 aaKnown RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 CAND1Q86VP6 1230 aaKnown RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 ZNF398Q8TD17 642 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 LPAR1Q92633 364 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 TUBB6Q9BUF5 446 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 OCEL1Q9H607 264 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 MYOZ2Q9NPC6 264 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 TRPC5Q9UL62 973 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 LTBP1Q14766 1721 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 ROR2Q01974 943 aaKnown RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 FAM183BPQ6ZVS7 135 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 CMC1Q7Z7K0 106 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 AZIN2Q96A70 460 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 DNAJC1Q96KC8 554 aaKnown RBP16.7■□□□□ 0.26
SCARB1-202ENST00000339570 KLC2Q9H0B6 622 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 ZNF212Q9UDV6 495 aa16.7■□□□□ 0.26
SCARB1-202ENST00000339570 KRT38O76015 456 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 LSM8O95777 96 aaKnown RBP16.69■□□□□ 0.26
SCARB1-202ENST00000339570 FKBP1AP62942 108 aaKnown RBP16.69■□□□□ 0.26
SCARB1-202ENST00000339570 PTPN11Q06124 597 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-202ENST00000339570 LAMTOR4Q0VGL1 99 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 LGSNQ5TDP6 509 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 WDR49Q8IV35 697 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 PLD5Q8N7P1 536 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 FAM172AQ8WUF8 416 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 MARK4Q96L34 752 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 DHX33Q9H6R0 707 aaKnown RBP16.69■□□□□ 0.26
SCARB1-202ENST00000339570 POPDC2Q9HBU9 364 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 ETNK2Q9NVF9 386 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 ASNSD1Q9NWL6 643 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 BTBD7Q9P203 1132 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 PSAT1Q9Y617 370 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 KIF3CO14782 793 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 PLA2G6O60733 806 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 HNRNPCL1O60812 293 aaKnown RBP16.69■□□□□ 0.26
SCARB1-202ENST00000339570 TM7SF2O76062 418 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 DHRS4L1P0CG22 281 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 DLG1Q12959 904 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 KCNJ11Q14654 390 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 CCDC142Q17RM4 750 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 GALNT15Q8N3T1 639 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 PIP4K2CQ8TBX8 421 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 R3HDMLQ9H3Y0 253 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 IRAK4Q9NWZ3 460 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 ETAA1Q9NY74 926 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 PLA2G4CQ9UP65 541 aa16.69■□□□□ 0.26
SCARB1-202ENST00000339570 APOBEC2Q9Y235 224 aaKnown RBP16.69■□□□□ 0.26
SCARB1-202ENST00000339570 E7ESA3 106 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 AIM2O14862 343 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 OGTO15294 1046 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 APOEP02649 317 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 SERPINB5P36952 375 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 MLH1P40692 756 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 SLC18A2Q05940 514 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 ITGA9Q13797 1035 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 NCAPG2Q86XI2 1143 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 SULF1Q8IWU6 871 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 CCNYQ8ND76 341 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
SCARB1-202ENST00000339570 NDRG1Q92597 394 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms