RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 LPPQ93052 612 aa11.54□□□□□ -0.56
LRP1-202ENST00000338962 C9orf72Q96LT7 481 aa11.54□□□□□ -0.56
LRP1-202ENST00000338962 SERPINB12Q96P63 405 aa11.54□□□□□ -0.56
LRP1-202ENST00000338962 RNF157Q96PX1 679 aa11.54□□□□□ -0.56
LRP1-202ENST00000338962 HNRNPABQ99729 332 aaKnown RBP11.54□□□□□ -0.56
LRP1-202ENST00000338962 EPN3Q9H201 632 aa11.54□□□□□ -0.56
LRP1-202ENST00000338962 ELAC1Q9H777 363 aaKnown RBP11.54□□□□□ -0.56
LRP1-202ENST00000338962 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.54□□□□□ -0.56
LRP1-202ENST00000338962 ARL5CA6NH57 179 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 EBAG9O00559 213 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 ATP2C2O75185 946 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 EOMESO95936 686 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 NPR3P17342 541 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 PTPN1P18031 435 aaKnown RBP11.53□□□□□ -0.56
LRP1-202ENST00000338962 BMP8BP34820 402 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 RAB27AP51159 221 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 IFI35P80217 286 aaPredicted RBP11.53□□□□□ -0.56
LRP1-202ENST00000338962 ROR1Q01973 937 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 PPARDQ03181 441 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 AUHQ13825 339 aaKnown RBP11.53□□□□□ -0.56
LRP1-202ENST00000338962 ZC3H12AQ5D1E8 599 aaKnown RBP11.53□□□□□ -0.56
LRP1-202ENST00000338962 PPP6R3Q5H9R7 873 aaPredicted RBP11.53□□□□□ -0.56
LRP1-202ENST00000338962 ZNF598Q86UK7 904 aaKnown RBP11.53□□□□□ -0.56
LRP1-202ENST00000338962 SENP8Q96LD8 212 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 CCDC77Q9BR77 488 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 SNRNP25Q9BV90 132 aaKnown RBP11.53□□□□□ -0.56
LRP1-202ENST00000338962 DUSP16Q9BY84 665 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 C10orf88Q9H8K7 445 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 SAYSD1Q9NPB0 183 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 GPATCH2LQ9NWQ4 482 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 DDX43Q9NXZ2 648 aaKnown RBP11.53□□□□□ -0.56
LRP1-202ENST00000338962 CACNG4Q9UBN1 327 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 GIT1Q9Y2X7 761 aa11.53□□□□□ -0.56
LRP1-202ENST00000338962 GABRDO14764 452 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 FAM163BP0C2L3 166 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 ATP5DP30049 168 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 SCNN1GP51170 649 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 CLCNKBP51801 687 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 AFF1P51825 1210 aaKnown RBP11.52□□□□□ -0.56
LRP1-202ENST00000338962 ADIGQ0VDE8 80 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 NOMO1Q15155 1222 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 EFHC1Q5JVL4 640 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 DARS2Q6PI48 645 aaKnown RBP11.52□□□□□ -0.56
LRP1-202ENST00000338962 FOXR1Q6PIV2 292 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 CENPUQ71F23 418 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 OTOP2Q7RTS6 562 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 ZC3H18Q86VM9 953 aaKnown RBP11.52□□□□□ -0.56
LRP1-202ENST00000338962 VSIG1Q86XK7 387 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 SPATS2Q86XZ4 545 aaKnown RBP11.52□□□□□ -0.56
LRP1-202ENST00000338962 ECHDC2Q86YB7 292 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 PPIL6Q8IXY8 311 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 TMEM86AQ8N2M4 240 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 FAM71DQ8N9W8 422 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 RNF169Q8NCN4 708 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 FAM149B1Q96BN6 582 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 TTC25Q96NG3 672 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 SELENOSQ9BQE4 189 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 ZNF670Q9BS34 389 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 MED10Q9BTT4 135 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 PCDH18Q9HCL0 1135 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 PPANQ9NQ55 473 aaKnown RBP11.52□□□□□ -0.56
LRP1-202ENST00000338962 TANC1Q9C0D5 1861 aa11.52□□□□□ -0.56
LRP1-202ENST00000338962 A0A087WUV0 522 aaPredicted RBP11.52□□□□□ -0.57
LRP1-202ENST00000338962 SRRM3A6NNA2 597 aaPredicted RBP11.52□□□□□ -0.57
LRP1-202ENST00000338962 E7EVH7 732 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 CLDN5O00501 218 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 APOL1O14791 398 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 ABHD2P08910 425 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.57
LRP1-202ENST00000338962 TGM2P21980 687 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 STIP1P31948 543 aaKnown RBP11.52□□□□□ -0.57
LRP1-202ENST00000338962 MMP13P45452 471 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 LHX1P48742 406 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 BCAR1P56945 870 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 HIF1AQ16665 826 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 CCDC142Q17RM4 750 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 ANKRD20A8PQ5CZ79 823 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 MDH1BQ5I0G3 518 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 ERMARDQ5T6L9 678 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 NPNTQ6UXI9 565 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 DSTYKQ6XUX3 929 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
LRP1-202ENST00000338962 AGMOQ6ZNB7 445 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 UNC45BQ8IWX7 931 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 PRCCQ92733 491 aaPredicted RBP11.52□□□□□ -0.57
LRP1-202ENST00000338962 TOP1MTQ969P6 601 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 C11orf84Q9BUA3 381 aaPredicted RBP11.52□□□□□ -0.57
LRP1-202ENST00000338962 LRRC4Q9HBW1 653 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.52□□□□□ -0.57
LRP1-202ENST00000338962 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
LRP1-202ENST00000338962 HEY1Q9Y5J3 304 aa11.52□□□□□ -0.57
LRP1-202ENST00000338962 CASTOR2A6NHX0 329 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 GOLGA8MH3BSY2 632 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 TRIM66O15016 1216 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 TCEA3O75764 348 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 FAM200BP0CF97 657 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 TFE3P19532 575 aaPredicted RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 IL4RP24394 825 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 IGFBP6P24592 240 aaPredicted RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms