RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 ANKRD23Q86SG2 305 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 WNK4Q96J92 1243 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 GNL1P36915 607 aaPredicted RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 AVPR1AP37288 418 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 SLC12A3P55017 1021 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 TAS2R40P59535 323 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 FUT11Q495W5 492 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 SEL1L3Q68CR1 1132 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 SLFN11Q7Z7L1 901 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 ACSS2Q9NR19 701 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 RPS6KL1Q9Y6S9 549 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 AVILO75366 819 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 KPNA2P52292 529 aaKnown RBP13.66□□□□□ -0.22
COL2A1-201ENST00000337299 LSM3P62310 102 aaKnown RBP13.66□□□□□ -0.22
COL2A1-201ENST00000337299 SPIDRQ14159 915 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TBCELQ5QJ74 424 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 CDKL3Q8IVW4 592 aaPredicted RBP13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TDRD5Q8NAT2 981 aaKnown RBP13.66□□□□□ -0.22
COL2A1-201ENST00000337299 NLRP4Q96MN2 994 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 EML1O00423 815 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 ARHGEF9O43307 516 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TFPTP0C1Z6 253 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 MAGP20916 626 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 DGKDQ16760 1214 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 GALNTL6Q49A17 601 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 AGKQ53H12 422 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 SWSAP1Q6NVH7 229 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 KLHDC10Q6PID8 442 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TMEM179Q6ZVK1 233 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 CCDC60Q8IWA6 550 aaPredicted RBP13.66□□□□□ -0.22
COL2A1-201ENST00000337299 VGLL2Q8N8G2 317 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 FAM47BQ8NA70 645 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 MED10Q9BTT4 135 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 ADAM7Q9H2U9 754 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 CYP4F12Q9HCS2 524 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 BCL9O00512 1426 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TMEM150BA6NC51 233 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TTLL13PA6NNM8 815 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 C16orf96A6NNT2 1141 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 H3BSA7 217 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TBX3O15119 743 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 HPCAP84074 193 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 MYBPC3Q14896 1274 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TMEM110Q86TL2 294 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 SETD3Q86TU7 594 aaPredicted RBP13.66□□□□□ -0.22
COL2A1-201ENST00000337299 PARP8Q8N3A8 854 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF395Q9H8N7 513 aaPredicted RBP13.66□□□□□ -0.22
COL2A1-201ENST00000337299 TIMMDC1Q9NPL8 285 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 RABGEF1Q9UJ41 708 aa13.66□□□□□ -0.22
COL2A1-201ENST00000337299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.65□□□□□ -0.22
COL2A1-201ENST00000337299 NR4A1P22736 598 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 NFIAQ12857 509 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 VWA5B1Q5TIE3 1220 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 DCAF15Q66K64 600 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 DCAF4Q8WV16 495 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 CEP41Q9BYV8 373 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 BCAS3Q9H6U6 928 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 PARVBQ9HBI1 364 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 MRGBPQ9NV56 204 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 FER1L4A9Z1Z3 1794 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 CNTNAP4Q9C0A0 1308 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.65□□□□□ -0.22
COL2A1-201ENST00000337299 PTGES3LE9PB15 166 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 F8W8V4 182 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 RNASEH1O60930 286 aaKnown RBP13.65□□□□□ -0.22
COL2A1-201ENST00000337299 ZBTB11O95625 1053 aaPredicted RBP13.65□□□□□ -0.22
COL2A1-201ENST00000337299 SERPINE1P05121 402 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 CETPP11597 493 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 FMO1Q01740 532 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 SPP2Q13103 211 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 SAPCD2Q86UD0 394 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 HACE1Q8IYU2 909 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 VPS39Q96JC1 886 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 SEPHS2Q99611 448 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 PNPOQ9NVS9 261 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 ABHD2P08910 425 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 GLRA4Q5JXX5 417 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 CDC42EP5Q6NZY7 148 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 AAGABQ6PD74 315 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 LRRC15Q8TF66 581 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 SLC7A6OSQ96CW6 309 aaPredicted RBP13.65□□□□□ -0.22
COL2A1-201ENST00000337299 OMA1Q96E52 524 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 POLR3FQ9H1D9 316 aaPredicted RBP13.65□□□□□ -0.22
COL2A1-201ENST00000337299 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
COL2A1-201ENST00000337299 STXBP5LQ9Y2K9 1186 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
COL2A1-201ENST00000337299 PRPF4O43172 522 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL2A1-201ENST00000337299 LIASO43766 372 aa13.64□□□□□ -0.23
COL2A1-201ENST00000337299 COX4I1P13073 169 aa13.64□□□□□ -0.23
COL2A1-201ENST00000337299 SPRP35270 261 aaPredicted RBP13.64□□□□□ -0.23
COL2A1-201ENST00000337299 NT5C2P49902 561 aa13.64□□□□□ -0.23
COL2A1-201ENST00000337299 SOX10P56693 466 aa13.64□□□□□ -0.23
COL2A1-201ENST00000337299 ARSHQ5FYA8 562 aa13.64□□□□□ -0.23
COL2A1-201ENST00000337299 C6orf10Q5SRN2 563 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms