RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 ACBD5Q5T8D3 534 aaPredicted RBP10.49□□□□□ -0.73
HIF1A-202ENST00000337138 LRRC38Q5VT99 294 aa10.49□□□□□ -0.73
HIF1A-202ENST00000337138 LRRC74BQ6ZQY2 392 aa10.49□□□□□ -0.73
HIF1A-202ENST00000337138 CDHR3Q6ZTQ4 885 aa10.49□□□□□ -0.73
HIF1A-202ENST00000337138 OXNAD1Q96HP4 312 aaPredicted RBP10.49□□□□□ -0.73
HIF1A-202ENST00000337138 PTPRHQ9HD43 1115 aa10.49□□□□□ -0.73
HIF1A-202ENST00000337138 SHOC2Q9UQ13 582 aa10.49□□□□□ -0.73
HIF1A-202ENST00000337138 SNCAIPQ9Y6H5 919 aa10.49□□□□□ -0.73
HIF1A-202ENST00000337138 E5RJQ4 531 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 VWA5AO00534 786 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 B4GALT5O43286 388 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 LRCH4O75427 683 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 KCNA4P22459 653 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SP100P23497 879 aaPredicted RBP10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SLC25A3Q00325 362 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 PDE1BQ01064 536 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 BST1Q10588 318 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 DPYSL3Q14195 570 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 AMHR2Q16671 573 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SLFN12LQ6IEE8 588 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 TRNP1Q6NT89 227 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SULF1Q8IWU6 871 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 UNC5BQ8IZJ1 945 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 NME8Q8N427 588 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 FAM81AQ8TBF8 368 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 DEPDC1BQ8WUY9 529 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 CPXM1Q96SM3 734 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 PDGFDQ9GZP0 370 aaPredicted RBP10.48□□□□□ -0.73
HIF1A-202ENST00000337138 NIF3L1Q9GZT8 377 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SLC24A2Q9UI40 661 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 EVPLQ92817 2033 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SPECC1L-ADORA2AF8WAN1 911 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 KRT37O76014 449 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 ITGAVP06756 1048 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 KRT7P08729 469 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 CXCL8P10145 99 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 KDELR1P24390 212 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 PHKA2P46019 1235 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 BCAR1P56945 870 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 RPL10AP62906 217 aaKnown RBP10.48□□□□□ -0.73
HIF1A-202ENST00000337138 ZNF667Q5HYK9 610 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 TRIM74Q86UV6 250 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 TRIM73Q86UV7 250 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 CRLF3Q8IUI8 442 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 E2F7Q96AV8 911 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 CGRRF1Q99675 332 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 EPAS1Q99814 870 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 GTF2IRD1Q9UHL9 959 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 CITO14578 2027 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 A0A1B0GVG6 124 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 CXorf49A8MYA2 514 aaPredicted RBP10.48□□□□□ -0.73
HIF1A-202ENST00000337138 C2CD2LO14523 706 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 RTN3O95197 1032 aaPredicted RBP10.48□□□□□ -0.73
HIF1A-202ENST00000337138 PSMG1O95456 288 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 RBL1P28749 1068 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 NEK3P51956 506 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 MED21Q13503 144 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SEPT6Q14141 434 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SH3TC2Q8TF17 1288 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 INPP5DQ92835 1189 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 MTBPQ96DY7 904 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 PGLYRP2Q96PD5 576 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 IFT122Q9HBG6 1241 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 BTBD7Q9P203 1132 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 TXNDC16Q9P2K2 825 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 HMGXB4Q9UGU5 601 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 USP18Q9UMW8 372 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 TTLL3Q9Y4R7 772 aa10.48□□□□□ -0.73
HIF1A-202ENST00000337138 SCN1AP35498 2009 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 HMX2A2RU54 273 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 SPATA31C2B4DYI2 1134 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 CFLARO15519 480 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 MSX2P35548 267 aaPredicted RBP10.47□□□□□ -0.73
HIF1A-202ENST00000337138 ZNF280AP59817 542 aaPredicted RBP10.47□□□□□ -0.73
HIF1A-202ENST00000337138 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 DLK2Q6UY11 383 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 TMEM192Q8IY95 271 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 NDNQ99608 321 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 VPS11Q9H270 941 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 DDX56Q9NY93 547 aaKnown RBP10.47□□□□□ -0.73
HIF1A-202ENST00000337138 OATP04181 439 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 ITGB3P05106 788 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 FESP07332 822 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 ACADSP16219 412 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 MAGEA3P43357 314 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 AP2B1P63010 937 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 CDK16Q00536 496 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 MMEL1Q495T6 779 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 PCGF5Q86SE9 256 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 BANPQ8N9N5 519 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 CCNYQ8ND76 341 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 NRG4Q8WWG1 115 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 SKA1Q96BD8 255 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 ANKRD36BP1Q96IX9 119 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 EBF4Q9BQW3 602 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 NIFKQ9BYG3 293 aaKnown RBP10.47□□□□□ -0.73
HIF1A-202ENST00000337138 ACSS3Q9H6R3 686 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 CLIC5Q9NZA1 410 aa10.47□□□□□ -0.73
HIF1A-202ENST00000337138 PCDHGC3Q9UN70 934 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms