RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 MYH4Q9Y623 1939 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 SPATA31C2B4DYI2 1134 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 EEF2KO00418 725 aaKnown RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 SLC26A4O43511 780 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 TBC1D12O60347 775 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 CFHP08603 1231 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 GLRBP48167 497 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 TUBP50607 506 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 GTF2A2P52657 109 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 NRLP54845 237 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 OCRLQ01968 901 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 MAMLD1Q13495 774 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ACVR2BQ13705 512 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 KLHL38Q2WGJ6 581 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 FBXO47Q5MNV8 452 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ABHD15Q6UXT9 468 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF677Q86XU0 584 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 EGFL6Q8IUX8 553 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 WDR75Q8IWA0 830 aaKnown RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF669Q96BR6 464 aaPredicted RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 HIC2Q96JB3 615 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF512Q96ME7 567 aaPredicted RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 TTC25Q96NG3 672 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 DCLK3Q9C098 648 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 CDT1Q9H211 546 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ARL8BQ9NVJ2 186 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 SMG5Q9UPR3 1016 aaKnown RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF711Q9Y462 761 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 PEX11AO75192 247 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 FAM200BP0CF97 657 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 KCNA2P16389 499 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 SP100P23497 879 aaPredicted RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 GSTT1P30711 240 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 DRG2P55039 364 aaKnown RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 AP2B1P63010 937 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 PRAMEP78395 509 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ADIGQ0VDE8 80 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 NR1H3Q13133 447 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 EFTUD2Q15029 972 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 CELF3Q5SZQ8 465 aaKnown RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 EMC10Q5UCC4 262 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 PRPF39Q86UA1 669 aaKnown RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 TLK2Q86UE8 772 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 TMEM192Q8IY95 271 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 RFWD2Q8NHY2 731 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 GABPB2Q8TAK5 448 aaPredicted RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 USP6NLQ92738 828 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 DDX18Q9NVP1 670 aaKnown RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 LRCH1Q9Y2L9 728 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 RPS6KL1Q9Y6S9 549 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 WASF2Q9Y6W5 498 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 MAGEA13PA6NCF6 341 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 CXCL11O14625 94 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ZC3H11AO75152 810 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 AVILO75366 819 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 MICAL2O94851 1124 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 FARP2O94887 1054 aaPredicted RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 MT-CO1P00395 513 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 JCHAINP01591 159 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 IRF1P10914 325 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 CHRNB2P17787 502 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ARF4P18085 180 aaPredicted RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 TAP1Q03518 808 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 TRIM67Q6ZTA4 783 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 NIPA1Q7RTP0 329 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 TTC7BQ86TV6 843 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ZDHHC14Q8IZN3 488 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 JOSD2Q8TAC2 188 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 PYDC1Q8WXC3 89 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 C18orf25Q96B23 403 aaPredicted RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ZFP42Q96MM3 310 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 EPB41L4BQ9H329 900 aa6.7□□□□□ -1.34
HMG20A-201ENST00000336216 FAF1Q9UNN5 650 aaPredicted RBP6.7□□□□□ -1.34
HMG20A-201ENST00000336216 ADGRA3Q8IWK6 1321 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 IRS2Q9Y4H2 1338 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 FAM237BA0A1B0GVD1 139 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 C17orf102A2RUQ5 167 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 CLDN5O00501 218 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 AHCYL1O43865 530 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 PYGLP06737 847 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 VDRP11473 427 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ELK3P41970 407 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 SNRPFP62306 86 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ROR2Q01974 943 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 SLC34A1Q06495 639 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 MED21Q13503 144 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 MYBPC2Q14324 1141 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 RASA2Q15283 850 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 BOLA3Q53S33 107 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 RNF43Q68DV7 783 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 LBX2Q6XYB7 198 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ZCCHC23Q6ZST2 131 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 TFAP2DQ7Z6R9 452 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 RIOX2Q8IUF8 465 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ADGRF2Q8IZF7 708 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 EFHBQ8N7U6 833 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 LPIN3Q9BQK8 851 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ABHD16BQ9H3Z7 469 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 WDCPQ9H6R7 721 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 CLIC5Q9NZA1 410 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms