RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 NEK3P51956 506 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 BST2Q10589 180 aaKnown RBP18.37■□□□□ 0.53
LRCH3-201ENST00000334859 TAF1BQ53T94 588 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-201ENST00000334859 TTC39BQ5VTQ0 682 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-201ENST00000334859 UNC93AQ86WB7 457 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 RFWD2Q8NHY2 731 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 ZC3H15Q8WU90 426 aaKnown RBP18.37■□□□□ 0.53
LRCH3-201ENST00000334859 STAMBPL1Q96FJ0 436 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 CDHR5Q9HBB8 845 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 ZFP69BQ9UJL9 534 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 MAD1L1Q9Y6D9 718 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 C2CD2LO14523 706 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 STRNO43815 780 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 CBX6O95503 412 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 PTPN9P43378 593 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 BCAT1P54687 386 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 PLEKHG4Q58EX7 1191 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 LDLRAD1Q5T700 205 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 STK32AQ8WU08 396 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 CXorf49A8MYA2 514 aaPredicted RBP18.36■□□□□ 0.53
LRCH3-201ENST00000334859 COPEO14579 308 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 KRT37O76014 449 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 L1CAMP32004 1257 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 ZBTB6Q15916 424 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 DPYSL2Q16555 572 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 SLC45A4Q5BKX6 768 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 FBXO47Q5MNV8 452 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 ARHGAP17Q68EM7 881 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 SLC26A9Q7LBE3 791 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 ZNF467Q7Z7K2 595 aaPredicted RBP18.36■□□□□ 0.53
LRCH3-201ENST00000334859 MTDHQ86UE4 582 aaKnown RBP18.36■□□□□ 0.53
LRCH3-201ENST00000334859 TRIM55Q9BYV6 548 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 MAGEB5Q9BZ81 275 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 PNPLA8Q9NP80 782 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 KLK14Q9P0G3 267 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 GJD2Q9UKL4 321 aa18.36■□□□□ 0.53
LRCH3-201ENST00000334859 CCL15-CCL14A0A0B4J2E2 113 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 BTBD19C9JJ37 291 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 BGNP21810 368 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 SLC18A2Q05940 514 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 CCL15Q16663 113 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 CCDC185Q8N715 623 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 ZNF398Q8TD17 642 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 UTP4Q969X6 686 aaKnown RBP18.35■□□□□ 0.53
LRCH3-201ENST00000334859 MAML3Q96JK9 1138 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 TRIM56Q9BRZ2 755 aaKnown RBP18.35■□□□□ 0.53
LRCH3-201ENST00000334859 ADCY6O43306 1168 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 GPR32O75388 356 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 ECM2O94769 699 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-201ENST00000334859 METTL18O95568 372 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 DHRS4L1P0CG22 281 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 LMO2P25791 158 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 ETV4P43268 484 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 SLC10A2Q12908 348 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-201ENST00000334859 BMPR2Q13873 1038 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 ACCSLQ4AC99 568 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 KCNT2Q6UVM3 1135 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 GPR142Q7Z601 462 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 CHSY1Q86X52 802 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 ANKRD52Q8NB46 1076 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 SRPK1Q96SB4 655 aaKnown RBP18.35■□□□□ 0.53
LRCH3-201ENST00000334859 KCTD15Q96SI1 283 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-201ENST00000334859 SNX25Q9H3E2 840 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 CNTN3Q9P232 1028 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 MCM8Q9UJA3 840 aa18.35■□□□□ 0.53
LRCH3-201ENST00000334859 UBQLN1Q9UMX0 589 aaKnown RBP18.35■□□□□ 0.53
LRCH3-201ENST00000334859 PIN4Q9Y237 131 aaKnown RBP18.35■□□□□ 0.53
LRCH3-201ENST00000334859 RRN3P2A6NIE6 340 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 SLC15A5A6NIM6 579 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 F5H423 210 aaPredicted RBP18.34■□□□□ 0.53
LRCH3-201ENST00000334859 APOEP02649 317 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 C1QAP02745 245 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 SNRPAP09012 282 aaKnown RBP18.34■□□□□ 0.53
LRCH3-201ENST00000334859 HOXD8P13378 290 aaPredicted RBP18.34■□□□□ 0.53
LRCH3-201ENST00000334859 ZFXP17010 805 aaPredicted RBP18.34■□□□□ 0.53
LRCH3-201ENST00000334859 GNL1P36915 607 aaPredicted RBP18.34■□□□□ 0.53
LRCH3-201ENST00000334859 MAGEA6P43360 314 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 SERPINB4P48594 390 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 HEATR6Q6AI08 1181 aaKnown RBP18.34■□□□□ 0.53
LRCH3-201ENST00000334859 UNC5AQ6ZN44 842 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 KBTBD7Q8WVZ9 684 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 CSPG4P5Q96PW8 444 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 TINF2Q9BSI4 451 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 ZNF487B1APH4 448 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 SMIM10L2AP0DMW4 78 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 SMIM10L2BP0DMW5 78 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 RASSF2P50749 326 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 ZNF618Q5T7W0 954 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 SH2D5Q6ZV89 423 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 CLNKQ7Z7G1 428 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 GIMAP7Q8NHV1 300 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 INPP5DQ92835 1189 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 QKIQ96PU8 341 aaKnown RBP eCLIP18.34■□□□□ 0.531e-8■■■■□ 22.4
LRCH3-201ENST00000334859 ABHD16BQ9H3Z7 469 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 PLAC1Q9HBJ0 212 aa18.34■□□□□ 0.53
LRCH3-201ENST00000334859 KPNA7A9QM74 516 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 SPTLC1O15269 473 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 UGT1A9O60656 530 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms