RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ARMC6Q6NXE6 501 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 DENND1BQ6P3S1 775 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 CCDC149Q6ZUS6 474 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ANKS3Q6ZW76 656 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 TRIM48Q8IWZ4 208 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 FAM129AQ9BZQ8 928 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 TKTL2Q9H0I9 626 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 CDH9Q9ULB4 789 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 IGKV6D-41A0A0C4DH26 115 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 RENBPP51606 427 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ARSHQ5FYA8 562 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 MSL3Q8N5Y2 521 aaKnown RBP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 B3GALNT2Q8NCR0 500 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 CCDC138Q96M89 665 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 YIPF2Q9BWQ6 316 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ABCC13Q9NSE7 274 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 SIK3Q9Y2K2 1263 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 LOC102724159A0A0B4J2E5 919 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 PPP1R37O75864 691 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 CRTAMO95727 393 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 PHEXP78562 749 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 PWP2Q15269 919 aaKnown RBP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 MAPRE2Q15555 327 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 USP41Q3LFD5 358 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 KIRREL3Q8IZU9 778 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 CASKIN2Q8WXE0 1202 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 CLEC4DQ8WXI8 215 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ZIM3Q96PE6 472 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 XPO6Q96QU8 1125 aaKnown RBP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 VANGL2Q9ULK5 521 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 COL1A2P08123 1366 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ANKRD65E5RJM6 399 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 DDX5P17844 614 aaKnown RBP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 PPP3CCP48454 512 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 KRT80Q6KB66 452 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 UGT3A1Q6NUS8 523 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 MFSD7Q6UXD7 560 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 PIGZQ86VD9 579 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 C4orf32Q8N8J7 132 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 CCDC124Q96CT7 223 aaKnown RBP15.49■□□□□ 0.07
C9orf47-201ENST00000334490 C12orf42Q96LP6 360 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 ANGPTL2Q9UKU9 493 aa15.49■□□□□ 0.07
C9orf47-201ENST00000334490 TMEM120BA0PK00 339 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 KCNK1O00180 336 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 BMP6P22004 513 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 ARHGDIAP52565 204 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 NOL9Q5SY16 702 aaKnown RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 C1orf146Q5VVC0 180 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 CES5AQ6NT32 575 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 FBXO25Q8TCJ0 367 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 LENG1Q96BZ8 264 aaPredicted RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 MRPL40Q9NQ50 206 aaKnown RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 RBPJLQ9UBG7 517 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 SEPT4O43236 478 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 GRIK3Q13003 919 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 SGO1Q5FBB7 561 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 HYIQ5T013 277 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 RIBC1Q8N443 379 aaPredicted RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 LZTR1Q8N653 840 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 FAM136AQ96C01 138 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 TRIM45Q9H8W5 580 aaPredicted RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 KLRG2A4D1S0 409 aaPredicted RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 F8VP50 259 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 TGFB1I1O43294 461 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 KDM1AO60341 852 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 NOS2P35228 1153 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 DCLRE1AQ6PJP8 1040 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 BRI3BPQ8WY22 251 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 HSFY1Q96LI6 401 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 DCLK3Q9C098 648 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 ETNK1Q9HBU6 452 aa15.48■□□□□ 0.07
C9orf47-201ENST00000334490 ZNF214Q9UL59 606 aaPredicted RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 XRN1Q8IZH2 1706 aaKnown RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 RGPD8O14715 1765 aaPredicted RBP15.48■□□□□ 0.07
C9orf47-201ENST00000334490 TLL1O43897 1013 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 VPS26AO75436 327 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 PCDH8O95206 1070 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 MDH1P40925 334 aaKnown RBP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 SPATA21Q7Z572 469 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 WNT8BQ93098 351 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 ASPSCR1Q9BZE9 553 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 CLPBQ9H078 707 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 PABPC3Q9H361 631 aaKnown RBP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 H0Y3Z8 333 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 PTPN7P35236 360 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 PRKCZQ05513 592 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 LPCAT1Q8NF37 534 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 LZICQ8WZA0 190 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 SPATA16Q9BXB7 569 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 ADGRA2Q96PE1 1338 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 SOAT2O75908 522 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 TRUB2O95900 331 aaKnown RBP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 ACADMP11310 421 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 SMPD1P17405 629 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 AARSP49588 968 aaKnown RBP eCLIP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 ALDH18A1P54886 795 aaKnown RBP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 TPGS1Q6ZTW0 290 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 FAM84AQ96KN4 292 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 LMO7Q8WWI1 1683 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms