RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 RBM22Q9NW64 420 aaKnown RBP eCLIP11.6□□□□□ -0.553e-7■■■■□ 20.5
POLR1B-202ENST00000333990 TFR2Q9UP52 801 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 TRAV19A0A0A6YYK7 116 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 CES2O00748 559 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 LGR5O75473 907 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 USP17L7P0C7H9 530 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 IGFBP4P22692 258 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 GLUD2P49448 558 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 ARHGAP1Q07960 439 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 MORF4L2Q15014 288 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 NPY5RQ15761 445 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 C9orf57Q5W0N0 161 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 VSTM1Q6UX27 236 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 KAT5Q92993 513 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 LENG9Q96B70 501 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 KLHL29Q96CT2 875 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 ATXN7L3BQ96GX2 97 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 SGSM3Q96HU1 749 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 SUDS3Q9H7L9 328 aaPredicted RBP11.6□□□□□ -0.55
POLR1B-202ENST00000333990 RPS6KL1Q9Y6S9 549 aa11.6□□□□□ -0.55
POLR1B-202ENST00000333990 TSPAN1O60635 241 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 TRUB2O95900 331 aaKnown RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 LRRC38Q5VT99 294 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 LRRC6Q86X45 466 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 BLOC1S5Q8TDH9 187 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 MRGBPQ9NV56 204 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 WHRNQ9P202 907 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 PPARGC1AQ9UBK2 798 aaKnown RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 SLC13A4Q9UKG4 626 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 PCDHA3Q9Y5H8 950 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 HACD1B0YJ81 288 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 FGF10O15520 208 aaPredicted RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 SLC10A3P09131 477 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 ITGALP20701 1170 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 KYNUQ16719 465 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 MIIPQ5JXC2 388 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 SYCP2LQ5T4T6 812 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 ELMO2Q96JJ3 720 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 GANQ9H2C0 597 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 PCDH9Q9HC56 1237 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 TXNRD2Q9NNW7 524 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 DNMT3LQ9UJW3 386 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 G3BP2Q9UN86 482 aaKnown RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 MRPS23Q9Y3D9 190 aaKnown RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 ZNF536O15090 1300 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 A0A0G2JND7 137 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 C22orf31O95567 290 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 ATP5BP06576 529 aaKnown RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 MIPP30301 263 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 IFNA8P32881 189 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 HSPA9P38646 679 aaKnown RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 VCPP55072 806 aaKnown RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 CTU1Q7Z7A3 348 aaKnown RBP11.59□□□□□ -0.55
POLR1B-202ENST00000333990 CSGALNACT1Q8TDX6 532 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 FAXDC2Q96IV6 333 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 PDZD7Q9H5P4 517 aa11.59□□□□□ -0.55
POLR1B-202ENST00000333990 F8VP50 259 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 OPHN1O60890 802 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 AOC2O75106 756 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 GLI1P08151 1106 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 HDCP19113 662 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 FAM47EQ6ZV65 393 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 SIAH1Q8IUQ4 282 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 MYLPFQ96A32 169 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 FGD4Q96M96 766 aa11.58□□□□□ -0.55
POLR1B-202ENST00000333990 NUP98P52948 1817 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 CCDC78A2IDD5 438 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 GSTA4O15217 222 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 FGF19O95750 216 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 GLUD1P00367 558 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 KCNA3P22001 575 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 DENND1BQ6P3S1 775 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 PHF13Q86YI8 300 aaPredicted RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 NPAS4Q8IUM7 802 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 LGI2Q8N0V4 545 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 BSNDQ8WZ55 320 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 C2orf49Q9BVC5 232 aaPredicted RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 UPF3AQ9H1J1 476 aaKnown RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 XPNPEP1Q9NQW7 623 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 FAM50BQ9Y247 325 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 A0A1B0GUA9 196 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 CHRM3P20309 590 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 PHEXP78562 749 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 ATG4AQ8WYN0 398 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 ELAC2Q9BQ52 826 aaKnown RBP11.58□□□□□ -0.56
POLR1B-202ENST00000333990 TKTL2Q9H0I9 626 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 VCX3AQ9NNX9 186 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 NT5MQ9NPB1 228 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 SMARCAL1Q9NZC9 954 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 GRID1Q9ULK0 1009 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 TLL2Q9Y6L7 1015 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 CAPN7Q9Y6W3 813 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 MAGEB16A2A368 324 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 ARVCFO00192 962 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 TIMM44O43615 452 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 CXCL14O95715 111 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 HMOX2P30519 316 aa11.58□□□□□ -0.56
POLR1B-202ENST00000333990 CARSP49589 748 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms