RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 NUDCD3Q8IVD9 361 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 CCDC185Q8N715 623 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 EIF1ADQ8N9N8 165 aaKnown RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 MCUQ8NE86 351 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 TFB1MQ8WVM0 346 aaKnown RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 CPT1BQ92523 772 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 WDCPQ9H6R7 721 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 TSR3Q9UJK0 312 aaKnown RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 LRFN2Q9ULH4 789 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 PHTF1Q9UMS5 762 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 MYH9P35579 1960 aaKnown RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 SNCBQ16143 134 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 KIAA1841Q6NSI8 718 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 ZCCHC23Q6ZST2 131 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 SPATA2LQ8IUW3 424 aaPredicted RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 EXT2Q93063 718 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 ZNF669Q96BR6 464 aaPredicted RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 PABPC5Q96DU9 382 aaKnown RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 CD248Q9HCU0 757 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 KIAA1257Q9ULG3 409 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 TRIM33Q9UPN9 1127 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 ARHGAP42A6NI28 874 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 KRT38O76015 456 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 TMEM63AO94886 807 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 AKR1A1P14550 325 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 GRIA1P42261 906 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 AFF1P51825 1210 aaKnown RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 SLC12A2P55011 1212 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 PITX1P78337 314 aaPredicted RBP13.55□□□□□ -0.24
C12orf56-201ENST00000333722 LCLAT1Q6UWP7 414 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 COLGALT1Q8NBJ5 622 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 IPMKQ8NFU5 416 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 PEBP4Q96S96 227 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 PCDH18Q9HCL0 1135 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 ACSS2Q9NR19 701 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 SLC12A6Q9UHW9 1150 aa13.55□□□□□ -0.24
C12orf56-201ENST00000333722 DNAJC25-GNG10A0A024R161 153 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 MYBPHLA2RUH7 354 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 SLC15A5A6NIM6 579 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 DRD4P21917 467 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 ETFBP38117 255 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 SCTRP47872 440 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 CLCNKBP51801 687 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 THEM5Q8N1Q8 247 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 SLC25A41Q8N5S1 370 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 SPON2Q9BUD6 331 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 AAASQ9NRG9 546 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 RPS6KL1Q9Y6S9 549 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 CITO14578 2027 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 WDR27A2RRH5 827 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 BGNP21810 368 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 CYP1B1Q16678 543 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 MSS51Q4VC12 460 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 C16orf46Q6P387 395 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 TFAP2DQ7Z6R9 452 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 SEPT5Q99719 369 aaPredicted RBP13.54□□□□□ -0.24
C12orf56-201ENST00000333722 TRIM55Q9BYV6 548 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 SLC40A1Q9NP59 571 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 KLC4Q9NSK0 619 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 ARL2BPQ9Y2Y0 163 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 IGF2BP3O00425 579 aaKnown RBP eCLIP13.54□□□□□ -0.24
C12orf56-201ENST00000333722 NDC80O14777 642 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 TADA2AO75478 443 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 NCF2P19878 526 aaPredicted RBP13.54□□□□□ -0.24
C12orf56-201ENST00000333722 LILRA4P59901 499 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 PLD5Q8N7P1 536 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 OLIG1Q8TAK6 271 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 PPP4R1Q8TF05 950 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 PDCD6IPQ8WUM4 868 aaKnown RBP13.54□□□□□ -0.24
C12orf56-201ENST00000333722 TMEM237Q96Q45 408 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 LHX5Q9H2C1 402 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 PCDHGC3Q9UN70 934 aa13.54□□□□□ -0.24
C12orf56-201ENST00000333722 GOLGA4Q13439 2230 aaKnown RBP13.53□□□□□ -0.24
C12orf56-201ENST00000333722 ZRSR2Q15696 482 aaKnown RBP13.53□□□□□ -0.24
C12orf56-201ENST00000333722 LRRC38Q5VT99 294 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 NRDE2Q9H7Z3 1164 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 BFARQ9NZS9 450 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
C12orf56-201ENST00000333722 ZFP69BQ9UJL9 534 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 HAO1Q9UJM8 370 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 C2CD4BA6NLJ0 364 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 NT5C1B-RDH14C9J2C7 533 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 SPTLC1O15269 473 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 SHOX2O60902 331 aaPredicted RBP13.53□□□□□ -0.24
C12orf56-201ENST00000333722 MGAT1P26572 445 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 MMP13P45452 471 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 PTP4A2Q12974 167 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 OLIG2Q13516 323 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 RASSF3Q86WH2 238 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 ANKRD52Q8NB46 1076 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 PCDH19Q8TAB3 1148 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 SGF29Q96ES7 293 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 PRDM12Q9H4Q4 367 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 SLC17A6Q9P2U8 582 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 IGKV6-21A0A0C4DH24 114 aa13.53□□□□□ -0.24
C12orf56-201ENST00000333722 FGFR1P11362 822 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms