RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CDO1Q16878 200 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 SLC5A9Q2M3M2 681 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 FAM102AQ5T9C2 384 aaPredicted RBP24.46■■□□□ 1.51
TSKU-201ENST00000333090 ACAD11Q709F0 780 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 FAM83AQ86UY5 434 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 WDR75Q8IWA0 830 aaKnown RBP24.46■■□□□ 1.51
TSKU-201ENST00000333090 SHCBP1LQ9BZQ2 653 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 HMX2A2RU54 273 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 SLC15A5A6NIM6 579 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 ADCY3O60266 1144 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 FAM189A1O60320 539 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 SORBS2O94875 1100 aaKnown RBP24.46■■□□□ 1.51
TSKU-201ENST00000333090 TFDP2Q14188 446 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 SFT2D3Q587I9 215 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 SNRNP48Q6IEG0 339 aaKnown RBP24.46■■□□□ 1.51
TSKU-201ENST00000333090 MARK2Q7KZI7 788 aaKnown RBP24.46■■□□□ 1.51
TSKU-201ENST00000333090 PDSS2Q86YH6 399 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 HIPK4Q8NE63 616 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 CDHR1Q96JP9 859 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 KLC2Q9H0B6 622 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 XYLT2Q9H1B5 865 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 ASNSD1Q9NWL6 643 aa24.46■■□□□ 1.51
TSKU-201ENST00000333090 PDE5AO76074 875 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 KRT19P08727 400 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 CRHR1P34998 444 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 OSTNP61366 133 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 CDK18Q07002 472 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 MED21Q13503 144 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
TSKU-201ENST00000333090 RNF111Q6ZNA4 994 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.45■■□□□ 1.52e-9■■■■□ 23.2
TSKU-201ENST00000333090 USP6NLQ92738 828 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 ADPGKQ9BRR6 497 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 CCDC28BQ9BUN5 200 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 TMEM134Q9H6X4 195 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 MKS1Q9NXB0 559 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 DNAJC16Q9Y2G8 782 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 PIK3R2O00459 728 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 ZBED1O96006 694 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 YY1P25490 414 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 FKBP1CQ5VVH2 108 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 AAGABQ6PD74 315 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 DENND5BQ6ZUT9 1274 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 RAB3IL1Q8TBN0 382 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 VCX3BQ9H321 246 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 CYP4F11Q9HBI6 524 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 VCX3AQ9NNX9 186 aa24.45■■□□□ 1.5
TSKU-201ENST00000333090 FASTKD1Q53R41 847 aaKnown RBP24.44■■□□□ 1.5
TSKU-201ENST00000333090 FAM47CQ5HY64 1035 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 DPH6Q7L8W6 267 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 ADGRF2Q8IZF7 708 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 SDCBP2Q9H190 292 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 ETNK2Q9NVF9 386 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 IL1RAPL1Q9NZN1 696 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 BIRC5O15392 142 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 ITM2AO43736 263 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 ATP5BP06576 529 aaKnown RBP24.44■■□□□ 1.5
TSKU-201ENST00000333090 HNRNPDQ14103 355 aaKnown RBP24.44■■□□□ 1.5
TSKU-201ENST00000333090 KRT81Q14533 505 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 C15orf59Q2T9L4 293 aaPredicted RBP24.44■■□□□ 1.5
TSKU-201ENST00000333090 C16orf46Q6P387 395 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 PIWIL2Q8TC59 973 aaKnown RBP24.44■■□□□ 1.5
TSKU-201ENST00000333090 APBB2Q92870 758 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 FRMD8Q9BZ67 464 aaPredicted RBP24.44■■□□□ 1.5
TSKU-201ENST00000333090 STK32BQ9NY57 414 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 ADAMTS6Q9UKP5 1117 aa24.44■■□□□ 1.5
TSKU-201ENST00000333090 MAFBQ9Y5Q3 323 aaPredicted RBP24.44■■□□□ 1.5
TSKU-201ENST00000333090 AQP4P55087 323 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 RPL10AP62906 217 aaKnown RBP24.43■■□□□ 1.5
TSKU-201ENST00000333090 DPY19L2Q6NUT2 758 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 ZPBP2Q6X784 338 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 ARCQ7LC44 396 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 SAMD7Q7Z3H4 446 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 ARHGAP22Q7Z5H3 698 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 ADGRG6Q86SQ4 1221 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 NIM1KQ8IY84 436 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 MPP5Q8N3R9 675 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 PLD5Q8N7P1 536 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 KCNN1Q92952 543 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 ZNF778Q96MU6 729 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 OLFM3Q96PB7 478 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 RNF157Q96PX1 679 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 NDNQ99608 321 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 MYOZ2Q9NPC6 264 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 APOBEC2Q9Y235 224 aaKnown RBP24.43■■□□□ 1.5
TSKU-201ENST00000333090 PROCP04070 461 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 PEX2P28328 305 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 COPAP53621 1224 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 SLC4A11Q8NBS3 891 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 DEPDC1BQ8WUY9 529 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 GPATCH2LQ9NWQ4 482 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 SORCS3Q9UPU3 1222 aa24.43■■□□□ 1.5
TSKU-201ENST00000333090 SPATA31C2B4DYI2 1134 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 HMGCRP04035 888 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 TUBB3Q13509 450 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 TMEM130Q8N3G9 435 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 B4GALNT2Q8NHY0 566 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 EZH1Q92800 747 aaPredicted RBP24.42■■□□□ 1.5
TSKU-201ENST00000333090 MRPL4Q9BYD3 311 aaKnown RBP24.42■■□□□ 1.5
TSKU-201ENST00000333090 HMGXB4Q9UGU5 601 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms