RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 HMBSP08397 361 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 JAM2P57087 298 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 LRRC32Q14392 662 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 ZNF677Q86XU0 584 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 SCUBE3Q8IX30 993 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 CLEC4CQ8WTT0 213 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 SLC4A5Q9BY07 1137 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 OSBPL6Q9BZF3 934 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 HELZP42694 1942 aaKnown RBP17.15■□□□□ 0.34
C11orf88-201ENST00000332814 TICRRQ7Z2Z1 1910 aa17.15■□□□□ 0.34
C11orf88-201ENST00000332814 A0A1W2PQC6 194 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 DCNP07585 359 aaKnown RBP17.14■□□□□ 0.33
C11orf88-201ENST00000332814 NCAM1P13591 858 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 COL9A1P20849 921 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 TARSP26639 723 aaKnown RBP17.14■□□□□ 0.33
C11orf88-201ENST00000332814 MAGEA9P43362 315 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 RPL34P49207 117 aaKnown RBP17.14■□□□□ 0.33
C11orf88-201ENST00000332814 NUBP1P53384 320 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 UBASH3AP57075 661 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 ARID5AQ03989 594 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 PON2Q15165 354 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 BHLHA9Q7RTU4 235 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 TMEM110Q86TL2 294 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 NOP9Q86U38 636 aaKnown RBP17.14■□□□□ 0.33
C11orf88-201ENST00000332814 CCDC105Q8IYK2 499 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 EPS8L1Q8TE68 723 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 DCLK3Q9C098 648 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 LINC00597Q9H2U6 94 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 ZNF510Q9Y2H8 683 aa17.14■□□□□ 0.33
C11orf88-201ENST00000332814 COL4A2P08572 1712 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 PI15O43692 258 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 LSM8O95777 96 aaKnown RBP17.13■□□□□ 0.33
C11orf88-201ENST00000332814 GJA4P35212 333 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 GRSF1Q12849 480 aaKnown RBP eCLIP17.13■□□□□ 0.33
C11orf88-201ENST00000332814 OR6B2Q6IFH4 312 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 TOGARAM2Q6ZUX3 1019 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 HTR3DQ70Z44 454 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 BBS7Q8IWZ6 715 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 PLD4Q96BZ4 506 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 NAP1L5Q96NT1 182 aaPredicted RBP17.13■□□□□ 0.33
C11orf88-201ENST00000332814 CPXM1Q96SM3 734 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 SEPT11Q9NVA2 429 aaKnown RBP17.13■□□□□ 0.33
C11orf88-201ENST00000332814 CYTH4Q9UIA0 394 aa17.13■□□□□ 0.33
C11orf88-201ENST00000332814 HBS1LQ9Y450 684 aaKnown RBP17.13■□□□□ 0.33
C11orf88-201ENST00000332814 KIF26AQ9ULI4 1882 aaPredicted RBP17.12■□□□□ 0.33
C11orf88-201ENST00000332814 MUC3AQ02505 3323 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 PAPSS1O43252 624 aaPredicted RBP17.12■□□□□ 0.33
C11orf88-201ENST00000332814 GABBR2O75899 941 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 STC2O76061 302 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 CYP17A1P05093 508 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 MMEP08473 750 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 FERP16591 822 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 HARS2P49590 506 aaKnown RBP17.12■□□□□ 0.33
C11orf88-201ENST00000332814 CDR2Q01850 454 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 GAD2Q05329 585 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 DHCR24Q15392 516 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 EFHC1Q5JVL4 640 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 DGKKQ5KSL6 1271 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 TRIM72Q6ZMU5 477 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 ERICH1Q86X53 443 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 RNF214Q8ND24 703 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 CD101Q93033 1021 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 P2RY13Q9BPV8 354 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 KCNH6Q9H252 994 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 POPDC2Q9HBU9 364 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 SFMBT1Q9UHJ3 866 aa17.12■□□□□ 0.33
C11orf88-201ENST00000332814 MTF2Q9Y483 593 aaPredicted RBP17.12■□□□□ 0.33
C11orf88-201ENST00000332814 COL4A3Q01955 1670 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 OTOL1A6NHN0 477 aaPredicted RBP17.11■□□□□ 0.33
C11orf88-201ENST00000332814 CBFA2T2O43439 604 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 HSF2BPO75031 334 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 ADH5P11766 374 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 CORO1AP31146 461 aaKnown RBP17.11■□□□□ 0.33
C11orf88-201ENST00000332814 CDH5P33151 784 aaPredicted RBP17.11■□□□□ 0.33
C11orf88-201ENST00000332814 YWHAZP63104 245 aaKnown RBP17.11■□□□□ 0.33
C11orf88-201ENST00000332814 NR1I3Q14994 352 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 ANO4Q32M45 955 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 MSANTD2Q6P1R3 559 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 TXNDC11Q6PKC3 985 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 ZDHHC17Q8IUH5 632 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 ADGRG2Q8IZP9 1017 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 WDTC1Q8N5D0 677 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 DTWD2Q8NBA8 298 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 SLC20A1Q8WUM9 679 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 DDX1Q92499 740 aaKnown RBP17.11■□□□□ 0.33
C11orf88-201ENST00000332814 WBP2Q969T9 261 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 SERPINB11Q96P15 392 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 NUP58Q9BVL2 599 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 LMAN1LQ9HAT1 526 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 SPATA6Q9NWH7 488 aaPredicted RBP17.11■□□□□ 0.33
C11orf88-201ENST00000332814 IFNKQ9P0W0 207 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 NOCTQ9UK39 431 aaKnown RBP17.11■□□□□ 0.33
C11orf88-201ENST00000332814 MYO6Q9UM54 1294 aa17.11■□□□□ 0.33
C11orf88-201ENST00000332814 MSI1O43347 362 aaKnown RBP17.1■□□□□ 0.33
C11orf88-201ENST00000332814 GALR2O43603 387 aaPredicted RBP17.1■□□□□ 0.33
C11orf88-201ENST00000332814 ERBB2P04626 1255 aa17.1■□□□□ 0.33
C11orf88-201ENST00000332814 GLI1P08151 1106 aa17.1■□□□□ 0.33
C11orf88-201ENST00000332814 CHKAP35790 457 aa17.1■□□□□ 0.33
C11orf88-201ENST00000332814 RPS9P46781 194 aaKnown RBP17.1■□□□□ 0.33
C11orf88-201ENST00000332814 ASIC2Q16515 512 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms