RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 RHBDL3P58872 404 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 CDC16Q13042 620 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 OTOAQ7RTW8 1153 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 RD3Q7Z3Z2 195 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 INPP5DQ92835 1189 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 TUBGCP3Q96CW5 907 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 SGSM3Q96HU1 749 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 MAGED4Q96JG8 741 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 PHTF1Q9UMS5 762 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 MANSC4A6NHS7 340 aaPredicted RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 MTSS1O43312 755 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 ADCY3O60266 1144 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 OR1E1P30953 314 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 STIP1P31948 543 aaKnown RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 KCNK10P57789 538 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 POM121L1PQ3SYA9 428 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 SLC27A1Q6PCB7 646 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 EME1Q96AY2 570 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 PHF21BQ96EK2 531 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 ROPN1BQ9BZX4 212 aaPredicted RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 ROPN1Q9HAT0 212 aaPredicted RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 RAD18Q9NS91 495 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 IGF2BP3O00425 579 aaKnown RBP eCLIP10.48□□□□□ -0.73
CHD3-201ENST00000330494 DAB1O75553 588 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 TGFB3P10600 412 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 UBA1P22314 1058 aaKnown RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 TNFSF9P41273 254 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 TUBP50607 506 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 IRAK1P51617 712 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 DENND1BQ6P3S1 775 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 FAM84AQ96KN4 292 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 MAGEB10Q96LZ2 347 aaPredicted RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 OLFML3Q9NRN5 406 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 INTS13Q9NVM9 706 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 DSEQ9UL01 958 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 AKR1A1P14550 325 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 COL9A3Q14050 684 aaPredicted RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 AGAP9Q5VTM2 703 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 IL31RAQ8NI17 732 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 MED8Q96G25 268 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 IDI2Q9BXS1 227 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 TAS2R14Q9NYV8 317 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 SELENONQ9NZV5 590 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 HEY2Q9UBP5 337 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 WDR27A2RRH5 827 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 TREML2Q5T2D2 321 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 TIGD7Q6NT04 549 aaPredicted RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 C16orf89Q6UX73 402 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 TPGS1Q6ZTW0 290 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 KIAA0319LQ8IZA0 1049 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 LPCAT1Q8NF37 534 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 ACTL9Q8TC94 416 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 SPATA16Q9BXB7 569 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 HAO1Q9UJM8 370 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 KCNK1O00180 336 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 PLA2G6O60733 806 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 KATNA1O75449 491 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 CCL23P55773 120 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 RPL10AP62906 217 aaKnown RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 HORMAD1Q86X24 394 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 ANKRD7Q92527 254 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 AGXT2Q9BYV1 514 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 PDGFCQ9NRA1 345 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 GPRC5DQ9NZD1 345 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 VANGL2Q9ULK5 521 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 E5RJQ4 531 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 USP12O75317 370 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 SPAG6O75602 509 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 TBX4P57082 545 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 NPNTQ6UXI9 565 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 PRUNE1Q86TP1 453 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 SERPINB12Q96P63 405 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 PAFAH2Q99487 392 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 FUCA2Q9BTY2 467 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 C6orf203Q9P0P8 240 aaPredicted RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 KIAA1257Q9ULG3 409 aa10.48□□□□□ -0.73
CHD3-201ENST00000330494 MTO1Q9Y2Z2 717 aaKnown RBP10.48□□□□□ -0.73
CHD3-201ENST00000330494 TRDMT1O14717 391 aaKnown RBP10.47□□□□□ -0.73
CHD3-201ENST00000330494 FGFR1P11362 822 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 BGNP21810 368 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 KCNMA1Q12791 1236 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 C15orf59Q2T9L4 293 aaPredicted RBP10.47□□□□□ -0.73
CHD3-201ENST00000330494 MRNIPQ6NTE8 343 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 LRRC6Q86X45 466 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 NETO2Q8NC67 525 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 ZNF555Q8NEP9 628 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 THUMPD3Q9BV44 507 aaKnown RBP10.47□□□□□ -0.73
CHD3-201ENST00000330494 PABPC3Q9H361 631 aaKnown RBP10.47□□□□□ -0.73
CHD3-201ENST00000330494 GAKO14976 1311 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 NKRFO15226 690 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHD3-201ENST00000330494 SOAT2O75908 522 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 MGAT1P26572 445 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 CATSPERGQ6ZRH7 1159 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 PCYOX1LQ8NBM8 494 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 PPP1R2P1Q96PQ5 205 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 ZNF189O75820 626 aaPredicted RBP10.47□□□□□ -0.73
CHD3-201ENST00000330494 EGFRP00533 1210 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 ETS1P14921 441 aa10.47□□□□□ -0.73
CHD3-201ENST00000330494 STARD3Q14849 445 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms