RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 OGTO15294 1046 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 CACNG3O60359 315 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 ZNF132P52740 706 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 GABREP78334 506 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 TLE1Q04724 770 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 ST3GAL1Q11201 340 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 PRAMEF14Q5SWL7 426 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 HAUS3Q68CZ6 603 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 CLEC18BQ6UXF7 455 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 CACUL1Q86Y37 369 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 CLEC18CQ8NCF0 446 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 FBXO18Q8NFZ0 1043 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 SAP25Q8TEE9 199 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 BICD1Q96G01 975 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 CEP295NLQ96MC4 621 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 XPO6Q96QU8 1125 aaKnown RBP15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 DPP3Q9NY33 737 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 EHD2Q9NZN4 543 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 KIAA1024Q9UPX6 916 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 SH3BP1Q9Y3L3 701 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 ARID1BQ8NFD5 2236 aaPredicted RBP15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 MYH10P35580 1976 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 NEDD8-MDP1E9PL57 170 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 MT-CO3P00414 261 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 CCT6AP40227 531 aaKnown RBP15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 RIPPLY3P57055 190 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 C21orf59P57076 290 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 GUCY1B3Q02153 619 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 SHBQ15464 509 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 CCDC81Q6ZN84 652 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 BIRC7Q96CA5 298 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 VCPIP1Q96JH7 1222 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 DUSP9Q99956 384 aaKnown RBP15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 RUSC1Q9BVN2 902 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 LRWD1Q9UFC0 647 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 CPSF3Q9UKF6 684 aaKnown RBP15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 L1RE1Q9UN81 338 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 C2CD2Q9Y426 696 aa15.7■□□□□ 0.1
CTHRC1-201ENST00000330295 MYH11P35749 1972 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 UTP20O75691 2785 aaKnown RBP15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 CKMT2P17540 419 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 ITGB6P18564 788 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 CD27P26842 260 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 ACSL1P33121 698 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 SMTNP53814 917 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 LINC00303Q3SY05 128 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 VSTM1Q6UX27 236 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 XKR5Q6UX68 686 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 ZNF560Q96MR9 790 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 MMS19Q96T76 1030 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 BBS2Q9BXC9 721 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 ACE2Q9BYF1 805 aaPredicted RBP15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 ASCL3Q9NQ33 180 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 THSD1Q9NS62 852 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 DDX19AQ9NUU7 478 aaKnown RBP15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 KCNG1Q9UIX4 513 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 NBASA2RRP1 2371 aa15.69■□□□□ 0.1
CTHRC1-201ENST00000330295 CKAP5Q14008 2032 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 H3BQV1 296 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 VILLO15195 856 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 SYNCRIPO60506 623 aaKnown RBP15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 TYRP14679 529 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 ANXA13P27216 316 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 CDC25AP30304 524 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 MCM7P33993 719 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 LSSP48449 732 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 DGKGP49619 791 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 LIG4P49917 911 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 COPAP53621 1224 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 TAF10Q12962 218 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 ORC2Q13416 577 aaPredicted RBP15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 C4orf50Q6ZRC1 276 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 TMEM86AQ8N2M4 240 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 ASB7Q9H672 318 aa15.68■□□□□ 0.1
CTHRC1-201ENST00000330295 NPC1O15118 1278 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 YKT6O15498 198 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 HCRTO43612 131 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 TSPAN3O60637 253 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 HUS1O60921 280 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 FSBPO95073 299 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 PLS3P13797 630 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 BDNFP23560 247 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 TRAPPC10P48553 1259 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 NOP14P78316 857 aaKnown RBP15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 E2F1Q01094 437 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 ENPP2Q13822 863 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 RINT1Q6NUQ1 792 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 FAM171BQ6P995 826 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 C1orf186Q6ZWK4 172 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 OSTM1Q86WC4 334 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 ORAI3Q9BRQ5 295 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 TRIM9Q9C026 710 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 POLR1BQ9H9Y6 1135 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 MAGEC2Q9UBF1 373 aaPredicted RBP15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 ICE1Q9Y2F5 2266 aa15.67■□□□□ 0.1
CTHRC1-201ENST00000330295 PLXNA2O75051 1894 aa15.66■□□□□ 0.1
CTHRC1-201ENST00000330295 A0A0B4J269 797 aa15.66■□□□□ 0.1
CTHRC1-201ENST00000330295 HNRNPDLO14979 420 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms