RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DUSP6Q16828 381 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 LRIT3Q3SXY7 679 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 RAB6CQ53S08 254 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 PPM1LQ5SGD2 360 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 SNX30Q5VWJ9 437 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 ELMSAN1Q6PJG2 1045 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 DNAJB7Q7Z6W7 309 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 ADGRD2Q7Z7M1 963 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 TAC4Q86UU9 113 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 KATNAL2Q8IYT4 538 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 PBKQ96KB5 322 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 PEBP4Q96S96 227 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 PSMB7Q99436 277 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 RAB6CQ9H0N0 254 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 FAM204AQ9H8W3 233 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 OLA1Q9NTK5 396 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 DPP7Q9UHL4 492 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 CDC23Q9UJX2 597 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 USP18Q9UMW8 372 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 M0QYT0 321 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 PRPSAP2O60256 369 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 SRGAP2O75044 1071 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 IGLV3-25P01717 112 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 KRT7P08729 469 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 POU2F2P09086 479 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 RALAP11233 206 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 IL1R2P27930 398 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 GJC1P36383 396 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 PPP3CCP48454 512 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 DEUP1Q05D60 604 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 DCAF12L1Q5VU92 463 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 CYP4V2Q6ZWL3 525 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 ELMOD1Q8N336 334 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 RNF139Q8WU17 664 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 ZNF512Q96ME7 567 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 CDK5RAP1Q96SZ6 601 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 CDCA3Q99618 268 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 L2HGDHQ9H9P8 463 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 TMEM51Q9NW97 253 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 DDX56Q9NY93 547 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 F9P00740 461 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 HNRNPA1P09651 372 aaKnown RBP eCLIP10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 RARGP13631 454 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 CXCR5P32302 372 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 TXNRD3NBQ6F5E7 133 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 ZNF276Q8N554 614 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 COG1Q8WTW3 980 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 TEKT4Q8WW24 435 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 TLE6Q9H808 572 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 PIGVQ9NUD9 493 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 DDIT4Q9NX09 232 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 TRPM5Q9NZQ8 1165 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 PCSK1NQ9UHG2 260 aa10.68□□□□□ -0.7
VIPAS39-201ENST00000327028 TMEM265A0A087WTH1 108 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ZNF840PA6NDX5 716 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 PER2O15055 1255 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 IRAK2O43187 625 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 TADA3O75528 432 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 KRT1P04264 644 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 GBP1P32455 592 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 TUBP50607 506 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 NME3Q13232 169 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 WHAMMP3Q1A5X7 153 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 SCYL2Q6P3W7 929 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 RSRC2Q7L4I2 434 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 RBM23Q86U06 439 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 TMC8Q8IU68 726 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 EXD1Q8NHP7 514 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ADAM32Q8TC27 787 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 CASP10Q92851 521 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 PPP2R3CQ969Q6 453 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 SERPINB11Q96P15 392 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ZWILCHQ9H900 591 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ZNF334Q9HCZ1 680 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 HCFC2Q9Y5Z7 792 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ANAPC1Q9H1A4 1944 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 RFXAPO00287 272 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 MDM4O15151 490 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ZNF185O15231 689 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 NRIP1P48552 1158 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ATXN1P54253 815 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 EIF4EBP2Q13542 120 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 BOLA3Q53S33 107 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 SND1Q7KZF4 910 aaKnown RBP eCLIP10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 TADA2BQ86TJ2 420 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 RBM41Q96IZ5 413 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 LRRC3Q9BY71 257 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ZNF576Q9H609 170 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 IL21Q9HBE4 155 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 WDR6Q9NNW5 1121 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 ZDHHC7Q9NXF8 308 aa10.67□□□□□ -0.7
VIPAS39-201ENST00000327028 DENND4CQ5VZ89 1909 aa10.66□□□□□ -0.7
VIPAS39-201ENST00000327028 SYNJ2BP-COX16A0A087WUM0 186 aa10.66□□□□□ -0.7
VIPAS39-201ENST00000327028 CCL16O15467 120 aa10.66□□□□□ -0.7
VIPAS39-201ENST00000327028 TLR5O60602 858 aa10.66□□□□□ -0.7
VIPAS39-201ENST00000327028 XYLBO75191 536 aa10.66□□□□□ -0.7
VIPAS39-201ENST00000327028 F11P03951 625 aa10.66□□□□□ -0.7
VIPAS39-201ENST00000327028 RARAP10276 462 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms