RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 COG7P83436 770 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 C10orf76Q5T2E6 689 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 PPP1R26Q5T8A7 1209 aaPredicted RBP18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 ARHGAP17Q68EM7 881 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 GRAMD4Q6IC98 578 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 SDE2Q6IQ49 451 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 CYP2U1Q7Z449 544 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 ARHGAP18Q8N392 663 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 TMEM176AQ96HP8 235 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 CISHQ9NSE2 258 aa18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 BCCIPQ9P287 314 aaKnown RBP eCLIP18.63■□□□□ 0.57
PTPMT1-201ENST00000326656 A0A1W2PQH9 124 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 SLC16A3O15427 465 aaKnown RBP18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 BCKDHBP21953 392 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 CHKAP35790 457 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 FKBP3Q00688 224 aaKnown RBP18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 MAP7D1Q3KQU3 841 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 C10orf120Q5SQS8 335 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 ZNF658Q5TYW1 1059 aaPredicted RBP18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 Q6ZNB5 142 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 SCD5Q86SK9 330 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 TTC30AQ86WT1 665 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 FMR1NBQ8N0W7 255 aaPredicted RBP18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 SEMA4DQ92854 862 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 JAKMIP2Q96AA8 810 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 EDEM2Q9BV94 578 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 DCLK3Q9C098 648 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 SMOC1Q9H4F8 434 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 MMRN2Q9H8L6 949 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 DNAJC17Q9NVM6 304 aaKnown RBP18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 EVLQ9UI08 416 aaPredicted RBP18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 NAGPAQ9UK23 515 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 COQ4Q9Y3A0 265 aa18.62■□□□□ 0.57
PTPMT1-201ENST00000326656 KMT2BQ9UMN6 2715 aaPredicted RBP18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 GOLGA6L4A6NEF3 574 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 NEDD8-MDP1E9PL57 170 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 GFRA2O00451 464 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 SMC2O95347 1197 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 HOXD12P35452 270 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 DHPSP49366 369 aaPredicted RBP18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 RAD23BP54727 409 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 E2F5Q15329 346 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 DAB2IPQ5VWQ8 1189 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 SLC36A4Q6YBV0 504 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 ZC3H3Q8IXZ2 948 aaKnown RBP18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 PGBD3Q8N328 593 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 ANKRD52Q8NB46 1076 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 SLC4A11Q8NBS3 891 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 SPATA20Q8TB22 786 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 HMGB4Q8WW32 186 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 TSG101Q99816 390 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 HOOK1Q9UJC3 728 aaKnown RBP18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 FBXO10Q9UK96 956 aa18.61■□□□□ 0.57
PTPMT1-201ENST00000326656 TCRBV21S2A2A0A5A6 115 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 LNP1A1A4G5 178 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 NPC1O15118 1278 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 STC2O76061 302 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 CISD3P0C7P0 127 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 HOXB2P14652 356 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 PRCPP42785 496 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 DGKGP49619 791 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 LMAN2Q12907 356 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 ZNF394Q53GI3 561 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 RAB41Q5JT25 222 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 TCEAL6Q6IPX3 200 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 SYT12Q8IV01 421 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 TCEAL3Q969E4 200 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 GABRG3Q99928 467 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 KIAA1257Q9ULG3 409 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 SLC27A6Q9Y2P4 619 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 CEP295Q9C0D2 2601 aa18.6■□□□□ 0.57
PTPMT1-201ENST00000326656 A0A1W2PQF6 199 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 AP5Z1O43299 807 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 ZNF217O75362 1048 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 KCNK5O95279 499 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 ZNF132P52740 706 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 YWHAEP62258 255 aaKnown RBP18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 SHC2P98077 582 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 PNOCQ13519 176 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 N4BP2L1Q5TBK1 243 aaPredicted RBP18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 PM20D1Q6GTS8 502 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 TPGS1Q6ZTW0 290 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 ELOA2Q8IYF1 753 aaPredicted RBP18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 SMYD4Q8IYR2 804 aaPredicted RBP18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 CHPFQ8IZ52 775 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 RLN3Q8WXF3 142 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 PIGKQ92643 395 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 EEF2KMTQ96G04 330 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 TIGD1Q96MW7 591 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 TMEM9BQ9NQ34 198 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 HCN2Q9UL51 889 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 STRIP2Q9ULQ0 834 aa18.59■□□□□ 0.57
PTPMT1-201ENST00000326656 C4orf47A7E2U8 309 aa18.58■□□□□ 0.56
PTPMT1-201ENST00000326656 TRIM24O15164 1050 aa18.58■□□□□ 0.56
PTPMT1-201ENST00000326656 PENKP01210 267 aaPredicted RBP18.58■□□□□ 0.56
PTPMT1-201ENST00000326656 GABRG2P18507 467 aa18.58■□□□□ 0.56
PTPMT1-201ENST00000326656 PMLP29590 882 aa18.58■□□□□ 0.56
PTPMT1-201ENST00000326656 NUCB2P80303 420 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms