RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 RSPH3Q86UC2 560 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 CCNJLQ8IV13 435 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 TMEM176AQ96HP8 235 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 ZCWPW1Q9H0M4 648 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 RPF1Q9H9Y2 349 aaKnown RBP20.6■□□□□ 0.89
CRLF3-201ENST00000324238 SNRPAP09012 282 aaKnown RBP20.6■□□□□ 0.89
CRLF3-201ENST00000324238 KCNA4P22459 653 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 OAZ1P54368 228 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 SLC25A3Q00325 362 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 TAZQ16635 292 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 PQLC3Q8N755 202 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 SMC1BQ8NDV3 1235 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 PCDH19Q8TAB3 1148 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 ZNF398Q8TD17 642 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 TEKT4Q8WW24 435 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 RNF157Q96PX1 679 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 RNPEPQ9H4A4 650 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 PPCSQ9HAB8 311 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 ASNSD1Q9NWL6 643 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 RGS17Q9UGC6 210 aaPredicted RBP20.6■□□□□ 0.89
CRLF3-201ENST00000324238 ZNF112Q9UJU3 913 aa20.6■□□□□ 0.89
CRLF3-201ENST00000324238 MED7O43513 233 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 ITM2AO43736 263 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 GPD1P21695 349 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 OSBPP22059 807 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 NDST1P52848 882 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 RPL10AP62906 217 aaKnown RBP20.59■□□□□ 0.89
CRLF3-201ENST00000324238 TTLL12Q14166 644 aaPredicted RBP20.59■□□□□ 0.89
CRLF3-201ENST00000324238 AMHR2Q16671 573 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 FAM160B1Q5W0V3 765 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 MPZL3Q6UWV2 235 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 CES3Q6UWW8 571 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 FAM136AQ96C01 138 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 SPATC1LQ9H0A9 340 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 TXNRD2Q9NNW7 524 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 ZBTB42B2RXF5 422 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 USP2O75604 605 aaPredicted RBP20.59■□□□□ 0.89
CRLF3-201ENST00000324238 VTNP04004 478 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 GNAT1P11488 350 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 ACADSP16219 412 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 RIPOR1Q6ZS17 1223 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 PHACTR1Q9C0D0 580 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 PACSIN3Q9UKS6 424 aa20.59■□□□□ 0.89
CRLF3-201ENST00000324238 KRT37O76014 449 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 CHSY1Q86X52 802 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 PPP1R14CQ8TAE6 165 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 CLEC4CQ8WTT0 213 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 FAM172AQ8WUF8 416 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 CCDC124Q96CT7 223 aaKnown RBP20.58■□□□□ 0.89
CRLF3-201ENST00000324238 PANX3Q96QZ0 392 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 ETNK2Q9NVF9 386 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 KCNG1Q9UIX4 513 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 TSPAN16Q9UKR8 245 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 SLC15A5A6NIM6 579 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 E7ENQ6 273 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 ZMPSTE24O75844 475 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 C6orf222P0C671 652 aaPredicted RBP20.58■□□□□ 0.89
CRLF3-201ENST00000324238 EFNA5P52803 228 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 TMEM62Q0P6H9 643 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 CCDC14Q49A88 953 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 SH3TC2Q8TF17 1288 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 MOCOSQ96EN8 888 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 ATXN7L3BQ96GX2 97 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 LHX5Q9H2C1 402 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 PPM1HQ9ULR3 514 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 EFR3BQ9Y2G0 817 aa20.58■□□□□ 0.89
CRLF3-201ENST00000324238 IGKV6D-21A0A0A0MT36 114 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.58■□□□□ 0.88
CRLF3-201ENST00000324238 STAG3L1P0CL83 205 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 RPS12P25398 132 aaKnown RBP20.58■□□□□ 0.88
CRLF3-201ENST00000324238 STIP1P31948 543 aaKnown RBP20.58■□□□□ 0.88
CRLF3-201ENST00000324238 ZNF143P52747 638 aaPredicted RBP20.58■□□□□ 0.88
CRLF3-201ENST00000324238 OLIG2Q13516 323 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 RALGPS1Q5JS13 557 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 VWA5B1Q5TIE3 1220 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 LBX2Q6XYB7 198 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 GSTCDQ8NEC7 633 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 MCRS1Q96EZ8 462 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 CYP4F11Q9HBI6 524 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 FETUBQ9UGM5 382 aa20.58■□□□□ 0.88
CRLF3-201ENST00000324238 ARHGAP42A6NI28 874 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 GTF2A2P52657 109 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 EPHB1P54762 984 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 POLE2P56282 527 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 SLC10A2Q12908 348 aaPredicted RBP20.57■□□□□ 0.88
CRLF3-201ENST00000324238 C1orf146Q5VVC0 180 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 PMF1Q6P1K2 205 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 ATG14Q6ZNE5 492 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 AGR3Q8TD06 166 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 TSC22D3Q99576 134 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 SLC7A8Q9UHI5 535 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 C2CD2Q9Y426 696 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 C2CD4BA6NLJ0 364 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 CILPO75339 1184 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 PDE5AO76074 875 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 ABCG1P45844 678 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 BAG6P46379 1132 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 AP3M2P53677 418 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 FOXB2Q5VYV0 432 aa20.57■□□□□ 0.88
CRLF3-201ENST00000324238 METTL7BQ6UX53 244 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms