RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CCDC185Q8N715 623 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 C3orf58Q8NDZ4 430 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CENPIQ92674 756 aaPredicted RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 ZNF317Q96PQ6 595 aaPredicted RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 NRDE2Q9H7Z3 1164 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CHST12Q9NRB3 414 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 RAB6BQ9NRW1 208 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 PLSCR2Q9NRY7 297 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 ARIH1Q9Y4X5 557 aaPredicted RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 ZBED1O96006 694 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 ELNP15502 786 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 TGM2P21980 687 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 GCAP28676 217 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CCND3P30281 292 aaPredicted RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 GPX6P59796 221 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 PITX1P78337 314 aaPredicted RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 GBE1Q04446 702 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 IFT88Q13099 833 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 DPYSL2Q16555 572 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 PAN2Q504Q3 1202 aaKnown RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 GKAP1Q5VSY0 366 aaPredicted RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 DSTYKQ6XUX3 929 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 AGMOQ6ZNB7 445 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CLEC20AQ6ZU45 233 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 ARCQ7LC44 396 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 PALM2Q8IXS6 379 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 SIX6OS1Q8N1H7 587 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 PYROXD2Q8N2H3 581 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 FBXO36Q8NEA4 188 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 FAF2Q96CS3 445 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CAPNS2Q96L46 248 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CYLDQ9NQC7 956 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 KRT82Q9NSB4 513 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 LGALS13Q9UHV8 139 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 PADI3Q9ULW8 664 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 MYBPHLA2RUH7 354 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 I3L4J1 428 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 ADAMTS4O75173 837 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 AVILO75366 819 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 POMCP01189 267 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 KRT15P19012 456 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 DRD4P21917 467 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 SCNN1AP37088 669 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 RGS19P49795 217 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 SULT1E1P49888 294 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 TKTL1P51854 596 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CORO7P57737 925 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 MRPS5P82675 430 aaKnown RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 SLC25A52Q3SY17 297 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 COL13A1Q5TAT6 717 aaPredicted RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 FAXCQ5TGI0 409 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 MICALCLQ6ZW33 695 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 TADA2BQ86TJ2 420 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 LRRC34Q8IZ02 419 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 GDAP1Q8TB36 358 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 MAML1Q92585 1016 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 PCED1BQ96HM7 432 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 SEC16BQ96JE7 1060 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CABS1Q96KC9 395 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 KCNK16Q96T55 309 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 WDR83Q9BRX9 315 aaKnown RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 UBN1Q9NPG3 1134 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CRTAC1Q9NQ79 661 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 MTMR10Q9NXD2 777 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 EURLQ9NYK6 297 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CLUHO75153 1309 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 B3GAT3O94766 335 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 KIAA0754O94854 1291 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 FAM200BP0CF97 657 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 GOT1P17174 413 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 CAP1Q01518 475 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 RNASELQ05823 741 aaKnown RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 SLC10A2Q12908 348 aaPredicted RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 NME3Q13232 169 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 NOGQ13253 232 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 SYPL2Q5VXT5 272 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 STRADAQ7RTN6 431 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 ATP11CQ8NB49 1132 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 CCDC110Q8TBZ0 833 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 CSPG4P5Q96PW8 444 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 SYT15Q9BQS2 421 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 KIF9Q9HAQ2 790 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 TMPRSS4Q9NRS4 437 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 PAK5Q9P286 719 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 CHMP2BQ9UQN3 213 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 NOD1Q9Y239 953 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 M0QYT0 321 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 MGEA5O60502 916 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 APRTP07741 180 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 PRKAR2AP13861 404 aaKnown RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 AMPD1P23109 780 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 PHBP35232 272 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 LHX1P48742 406 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 EFTUD2Q15029 972 aaKnown RBP eCLIP7.86□□□□□ -1.15
IFT88-201ENST00000319980 PKN2Q16513 984 aaKnown RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 RNF187Q5TA31 235 aaPredicted RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 HFE2Q6ZVN8 426 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 VSIG1Q86XK7 387 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 SPATS2Q86XZ4 545 aaKnown RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 CACNA2D3Q8IZS8 1091 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms