RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SNAI1O95863 264 aaPredicted RBP16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 LYNP07948 512 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 EIF3EP60228 445 aaKnown RBP16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 CAV1Q03135 178 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 PPP1R26Q5T8A7 1209 aaPredicted RBP16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 TRNP1Q6NT89 227 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 FAM183BPQ6ZVS7 135 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 OR6J1Q8NGC5 347 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 ZMAT2Q96NC0 199 aaKnown RBP16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 FAM210AQ96ND0 272 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 GOLGA2P5Q9HBQ8 144 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 SAR1AQ9NR31 198 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 TAS2R1Q9NYW7 299 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 COX16Q9P0S2 106 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 RPS6KL1Q9Y6S9 549 aa16.16■□□□□ 0.18
SHROOM1-201ENST00000319854 A0A0G2JND7 137 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 GYG2O15488 501 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 CCDC22O60826 627 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 RBP3P10745 1247 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 GPD2P43304 727 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 ATXN1P54253 815 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 LMNB2Q03252 620 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 THOC5Q13769 683 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 OASLQ15646 514 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 CCDC142Q17RM4 750 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 ZNF484Q5JVG2 852 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 FNBP1LQ5T0N5 605 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 BCO2Q9BYV7 579 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 DMAP1Q9NPF5 467 aaPredicted RBP16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 STX18Q9P2W9 335 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 NR2E3Q9Y5X4 410 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 H7C0C1 242 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 AVILO75366 819 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 ADORA2BP29275 332 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 ATP5OP48047 213 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 DARS2Q6PI48 645 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 MAMDC4Q6UXC1 1216 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 TTC7BQ86TV6 843 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 HOMEZQ8IX15 550 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 BBOF1Q8ND07 529 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 ZNF184Q99676 751 aaPredicted RBP16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 CACNG4Q9UBN1 327 aa16.15■□□□□ 0.18
SHROOM1-201ENST00000319854 C3orf70A6NLC5 250 aaPredicted RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 TYROBPO43914 113 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 KRT7P08729 469 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 MCF2P10911 925 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 TFE3P19532 575 aaPredicted RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 ADRA1DP25100 572 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 SCNN1BP51168 640 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 CCNA1P78396 465 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 ZNF200P98182 395 aaPredicted RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 HIF1AQ16665 826 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 HHATQ5VTY9 493 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 PMF1Q6P1K2 205 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 TRIM74Q86UV6 250 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 TRIM73Q86UV7 250 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 DPEP3Q9H4B8 488 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 NXF3Q9H4D5 531 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 DDX56Q9NY93 547 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 RPL22P35268 128 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 KRT81Q14533 505 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 PABPC1LQ4VXU2 614 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 ZNF276Q8N554 614 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 FBXO27Q8NI29 283 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 CLEC4CQ8WTT0 213 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 PYROXD1Q8WU10 500 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 NDRG1Q92597 394 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 SMC6Q96SB8 1091 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 SPATA16Q9BXB7 569 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 CHMP2BQ9UQN3 213 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 P4HA1P13674 534 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 CPA2P48052 419 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 RBP5P82980 135 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 NR1H3Q13133 447 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 DYNC1I2Q13409 638 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 PPTC7Q8NI37 304 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 NT5C1AQ9BXI3 368 aa16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-201ENST00000319854 MAP3K7O43318 606 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 SERPINB3P29508 390 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 TNFAIP2Q03169 654 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 TAP1Q03518 808 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 ZNF792Q3KQV3 632 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 MARCH8Q5T0T0 291 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 RNASEH2BQ5TBB1 312 aaKnown RBP16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 CENPUQ71F23 418 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 VPS52Q8N1B4 723 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 BRI3BPQ8WY22 251 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 BARX2Q9UMQ3 279 aaPredicted RBP16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 TRIP11Q15643 1979 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 PRPSAP2O60256 369 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 LCP1P13796 627 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 CDH5P33151 784 aaPredicted RBP16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 RABGGTBP53611 331 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 ZNF618Q5T7W0 954 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 LRRC38Q5VT99 294 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 PPP1R2P3Q6NXS1 205 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 C3orf62Q6ZUJ4 267 aa16.13■□□□□ 0.17
SHROOM1-201ENST00000319854 LRRC6Q86X45 466 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms