RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PDXKO00764 312 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 ZNF217O75362 1048 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 CISD3P0C7P0 127 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 SLFN14P0C7P3 912 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 IRF1P10914 325 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 SPINK2P20155 84 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 ATP5C1P36542 298 aaKnown RBP15.01□□□□□ -0.01
RPP40-201ENST00000319533 AFMP43652 599 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 RPL6Q02878 288 aaKnown RBP15.01□□□□□ -0.01
RPP40-201ENST00000319533 INCA1Q0VD86 236 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 C1orf220Q5T0J3 134 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 RABEPKQ7Z6M1 372 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 GRAMD1CQ8IYS0 662 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 CEP57L1Q8IYX8 460 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 ZNF276Q8N554 614 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 C12orf29Q8N999 325 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 XPO6Q96QU8 1125 aaKnown RBP15.01□□□□□ -0.01
RPP40-201ENST00000319533 HNRNPABQ99729 332 aaKnown RBP15.01□□□□□ -0.01
RPP40-201ENST00000319533 SCAND2PQ9GZW5 306 aaPredicted RBP15.01□□□□□ -0.01
RPP40-201ENST00000319533 NACA2Q9H009 215 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 DNAJC17Q9NVM6 304 aaKnown RBP15.01□□□□□ -0.01
RPP40-201ENST00000319533 OSER1Q9NX31 292 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 FBXO10Q9UK96 956 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 PCDHA5Q9Y5H7 936 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 CEP192Q8TEP8 1941 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 SPEGQ15772 3267 aa15.01□□□□□ -0.01
RPP40-201ENST00000319533 ATXN2Q99700 1313 aaKnown RBP15□□□□□ -0.01
RPP40-201ENST00000319533 PRRT4C9JH25 899 aa15□□□□□ -0.01
RPP40-201ENST00000319533 GFRA2O00451 464 aa15□□□□□ -0.01
RPP40-201ENST00000319533 ACTN4O43707 911 aaKnown RBP15□□□□□ -0.01
RPP40-201ENST00000319533 FAM200BP0CF97 657 aa15□□□□□ -0.01
RPP40-201ENST00000319533 TYRP14679 529 aa15□□□□□ -0.01
RPP40-201ENST00000319533 NDUFV2P19404 249 aa15□□□□□ -0.01
RPP40-201ENST00000319533 MAPK8P45983 427 aa15□□□□□ -0.01
RPP40-201ENST00000319533 NUCB2P80303 420 aa15□□□□□ -0.01
RPP40-201ENST00000319533 ZNF33AQ06730 810 aa15□□□□□ -0.01
RPP40-201ENST00000319533 ORC1Q13415 861 aa15□□□□□ -0.01
RPP40-201ENST00000319533 KIAA1211LQ6NV74 962 aa15□□□□□ -0.01
RPP40-201ENST00000319533 Q6ZNB5 142 aa15□□□□□ -0.01
RPP40-201ENST00000319533 CLEC20AQ6ZU45 233 aa15□□□□□ -0.01
RPP40-201ENST00000319533 GPRIN1Q7Z2K8 1008 aa15□□□□□ -0.01
RPP40-201ENST00000319533 SLC41A1Q8IVJ1 513 aa15□□□□□ -0.01
RPP40-201ENST00000319533 IPO4Q8TEX9 1081 aaKnown RBP15□□□□□ -0.01
RPP40-201ENST00000319533 ZNF419Q96HQ0 510 aaPredicted RBP15□□□□□ -0.01
RPP40-201ENST00000319533 ACOX2Q99424 681 aa15□□□□□ -0.01
RPP40-201ENST00000319533 BBS2Q9BXC9 721 aa15□□□□□ -0.01
RPP40-201ENST00000319533 NMUR1Q9HB89 426 aa15□□□□□ -0.01
RPP40-201ENST00000319533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15□□□□□ -0.01
RPP40-201ENST00000319533 SERTAD1Q9UHV2 236 aa15□□□□□ -0.01
RPP40-201ENST00000319533 LSM7Q9UK45 103 aaKnown RBP15□□□□□ -0.01
RPP40-201ENST00000319533 NEUROG3Q9Y4Z2 214 aa15□□□□□ -0.01
RPP40-201ENST00000319533 A0A1W2PQD8 194 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 FAM221BA6H8Z2 402 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 NEDD8-MDP1E9PL57 170 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 MAPK13O15264 365 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 NR3C1P04150 777 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 CFIP05156 583 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 CMA1P23946 247 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 WASP42768 502 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 PLA2G4AP47712 749 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 MCCD1P59942 119 aaPredicted RBP14.99□□□□□ -0.01
RPP40-201ENST00000319533 GFPT1Q06210 699 aaPredicted RBP14.99□□□□□ -0.01
RPP40-201ENST00000319533 GOLGA8FQ08AF8 430 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 GOLGA8DPQ0D2H9 430 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 KMT5BQ4FZB7 885 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 SPOPLQ6IQ16 392 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 SDE2Q6IQ49 451 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 TOGARAM2Q6ZUX3 1019 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 METTL3Q86U44 580 aaKnown RBP14.99□□□□□ -0.01
RPP40-201ENST00000319533 CHPFQ8IZ52 775 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 PAGE5Q96GU1 130 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 TWNKQ96RR1 684 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 CYP3A43Q9HB55 503 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.99□□□□□ -0.01
RPP40-201ENST00000319533 FAM49BQ9NUQ9 324 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 EXOC1Q9NV70 894 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 DNAAF2Q9NVR5 837 aaKnown RBP14.99□□□□□ -0.01
RPP40-201ENST00000319533 TRAF3IP3Q9Y228 551 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 MSRB2Q9Y3D2 182 aa14.99□□□□□ -0.01
RPP40-201ENST00000319533 ARHGAP33O14559 1287 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 ZBTB24O43167 697 aaPredicted RBP14.98□□□□□ -0.01
RPP40-201ENST00000319533 CYP26A1O43174 497 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 HLA-DRAP01903 254 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 MYL1P05976 194 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 PSEN1P49768 467 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 KIF11P52732 1056 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 ENPEPQ07075 957 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 NFIL3Q16649 462 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 TPGS1Q6ZTW0 290 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 CCDC186Q7Z3E2 898 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 SCD5Q86SK9 330 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 HDDC3Q8N4P3 179 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 CYFIP2Q96F07 1278 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 P2RY11Q96G91 374 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 MRGPRX1Q96LB2 322 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 NT5C1AQ9BXI3 368 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 FSCN3Q9NQT6 498 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 USP25Q9UHP3 1055 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 DNMT3LQ9UJW3 386 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 SLC27A6Q9Y2P4 619 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms