RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 RNF38Q9H0F5 515 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 SMOC2Q9H3U7 446 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 MRPL47Q9HD33 250 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 LUC7LQ9NQ29 371 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 GDE1Q9NZC3 331 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 MYO1AQ9UBC5 1043 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 CDH7Q9ULB5 785 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 SCINQ9Y6U3 715 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 TCF20Q9UGU0 1960 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 BTNL10A8MVZ5 291 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 DPYSL4O14531 572 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 MTA2O94776 668 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 TBX18O95935 607 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 ABL1P00519 1130 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 NCAM1P13591 858 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 RNASE9P60153 205 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 SLC7A9P82251 487 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 OGDHQ02218 1023 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 EIF4EBP2Q13542 120 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 SMAD2Q15796 467 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 PUS10Q3MIT2 529 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 ARHGAP15Q53QZ3 475 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 DCAF6Q58WW2 860 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 GET4Q7L5D6 327 aaPredicted RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 BNIPLQ7Z465 357 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 TADA2BQ86TJ2 420 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 CMTM8Q8IZV2 173 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 FNIP1Q8TF40 1166 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 RXFP2Q8WXD0 754 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 RFFLQ8WZ73 363 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 ZFRQ96KR1 1074 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 MCEEQ96PE7 176 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 MYADMQ96S97 322 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 NPY6RQ99463 290 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 NUP85Q9BW27 656 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 ADAM33Q9BZ11 813 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 LACRTQ9GZZ8 138 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 OLA1Q9NTK5 396 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 UVRAGQ9P2Y5 699 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 DNMT3LQ9UJW3 386 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 NUDT5Q9UKK9 219 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 USTQ9Y2C2 406 aa13.22□□□□□ -0.29
CHMP2A-201ENST00000312547 A0A0A6YYK5 440 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 A0A0U1RQJ8 604 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 CAPN9O14815 690 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 MDM4O15151 490 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 HDCP19113 662 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 PTPN9P43378 593 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ZNF143P52747 638 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 PITX1P78337 314 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 TFF2Q03403 129 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ZNF252P-AS1Q0IIN9 211 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 CCDC14Q49A88 953 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 C10orf120Q5SQS8 335 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ZNF662Q6ZS27 426 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 RNF139Q8WU17 664 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ATRIPQ8WXE1 791 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 CENPIQ92674 756 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 TRIM7Q9C029 511 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 TRPV4Q9HBA0 871 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 RRN3Q9NYV6 651 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ZFP37Q9Y6Q3 630 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 MYH10P35580 1976 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
CHMP2A-201ENST00000312547 ENDOD1O94919 500 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 TRUB2O95900 331 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 CCDC175P0C221 793 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 LAMP2P13473 410 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 PDGFRAP16234 1089 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 TFE3P19532 575 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 GPD1P21695 349 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 SDC4P31431 198 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 ARHGAP25P42331 645 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 HADHBP55084 474 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 ZXDBP98169 803 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 EFEMP1Q12805 493 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 NNTQ13423 1086 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 SLC25A52Q3SY17 297 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 FAM78AQ5JUQ0 283 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 PTCRAQ6ISU1 281 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 OTOP3Q7RTS5 596 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 KIAA1328Q86T90 577 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 TAC4Q86UU9 113 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 RHOT2Q8IXI1 618 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 ZSCAN18Q8TBC5 510 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms