RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TTLL12Q14166 644 aaPredicted RBP26.29■■□□□ 1.8
HOXB3-201ENST00000311626 ZCCHC23Q6ZST2 131 aa26.29■■□□□ 1.8
HOXB3-201ENST00000311626 PRRT2Q7Z6L0 340 aaPredicted RBP26.29■■□□□ 1.8
HOXB3-201ENST00000311626 SKA1Q96BD8 255 aa26.29■■□□□ 1.8
HOXB3-201ENST00000311626 NSL1Q96IY1 281 aa26.29■■□□□ 1.8
HOXB3-201ENST00000311626 ASB7Q9H672 318 aa26.29■■□□□ 1.8
HOXB3-201ENST00000311626 SLC15A5A6NIM6 579 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 PDGFRBP09619 1106 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 CYP2F1P24903 491 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 TTLL4Q14679 1199 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 HSF5Q4G112 596 aaPredicted RBP26.28■■□□□ 1.8
HOXB3-201ENST00000311626 AFG1LQ8WV93 481 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 NDRG1Q92597 394 aaKnown RBP26.28■■□□□ 1.8
HOXB3-201ENST00000311626 C18orf25Q96B23 403 aaPredicted RBP26.28■■□□□ 1.8
HOXB3-201ENST00000311626 SAR1AQ9NR31 198 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 A0A0G2JMZ2 1700 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 LRRC37A2A6NM11 1700 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 DNAJC25-GNG10A0A024R161 153 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 FCHO1O14526 889 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 GYG2O15488 501 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 RFPL1O75677 317 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 SNRPAP09012 282 aaKnown RBP26.28■■□□□ 1.8
HOXB3-201ENST00000311626 TMPRSS15P98073 1019 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 INCA1Q0VD86 236 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 BST1Q10588 318 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 PYROXD2Q8N2H3 581 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 FBXO27Q8NI29 283 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 ZMAT2Q96NC0 199 aaKnown RBP26.28■■□□□ 1.8
HOXB3-201ENST00000311626 CEP41Q9BYV8 373 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 KLC2Q9H0B6 622 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 PPP2R3BQ9Y5P8 575 aa26.28■■□□□ 1.8
HOXB3-201ENST00000311626 SMAPO00193 183 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 TRAFD1O14545 582 aaPredicted RBP26.27■■□□□ 1.8
HOXB3-201ENST00000311626 TSPAN1O60635 241 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 ARHGAP1Q07960 439 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 CHI3L2Q15782 390 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 CHSY1Q86X52 802 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 ZNF398Q8TD17 642 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 MPHOSPH6Q99547 160 aaKnown RBP26.27■■□□□ 1.8
HOXB3-201ENST00000311626 BTBD10Q9BSF8 475 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 C20orf27Q9GZN8 174 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 TUBGCP4Q9UGJ1 667 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 LNPEPQ9UIQ6 1025 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 BRCA1P38398 1863 aaKnown RBP26.27■■□□□ 1.8
HOXB3-201ENST00000311626 GSC2O15499 205 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 LCP1P13796 627 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 TSHRP16473 764 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 ADORA2BP29275 332 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 PTDSS1P48651 473 aaKnown RBP26.27■■□□□ 1.8
HOXB3-201ENST00000311626 SLC6A3Q01959 620 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 KPNB1Q14974 876 aaKnown RBP26.27■■□□□ 1.8
HOXB3-201ENST00000311626 BOLA3Q53S33 107 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 C4orf50Q6ZRC1 276 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 OXNAD1Q96HP4 312 aaPredicted RBP26.27■■□□□ 1.8
HOXB3-201ENST00000311626 NRDE2Q9H7Z3 1164 aa26.27■■□□□ 1.8
HOXB3-201ENST00000311626 YY1P25490 414 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 CRYMQ14894 314 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 ZNF534Q76KX8 674 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 ARID3BQ8IVW6 561 aaPredicted RBP26.26■■□□□ 1.79
HOXB3-201ENST00000311626 MAB21L3Q8N8X9 362 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 NAF1Q96HR8 494 aaKnown RBP26.26■■□□□ 1.79
HOXB3-201ENST00000311626 PGLYRP2Q96PD5 576 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 VRTNQ9H8Y1 702 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 SNTG2Q9NY99 539 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 PLLPQ9Y342 182 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 HMX2A2RU54 273 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 SLC25A27O95847 323 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 KIZQ2M2Z5 673 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 ARMCX2Q7L311 632 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 OR6B3Q8NGW1 331 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 APOL6Q9BWW8 343 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 TAS2R1Q9NYW7 299 aa26.26■■□□□ 1.79
HOXB3-201ENST00000311626 MTO1Q9Y2Z2 717 aaKnown RBP26.26■■□□□ 1.79
HOXB3-201ENST00000311626 CCDC22O60826 627 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 KRT36O76013 467 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 KRT37O76014 449 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 NPTXRO95502 500 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 APOEP02649 317 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 CYP2C8P10632 490 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 ESRRAP11474 423 aaPredicted RBP26.25■■□□□ 1.79
HOXB3-201ENST00000311626 CCDC130P13994 396 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 ADORA2AP29274 412 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 GMPRP36959 345 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 PDK2Q15119 407 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 SLC9A4Q6AI14 798 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 DTX3LQ8TDB6 740 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 WDR60Q8WVS4 1066 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 TMPRSS4Q9NRS4 437 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 ITGA11Q9UKX5 1188 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 MYO18AQ92614 2054 aaKnown RBP26.25■■□□□ 1.79
HOXB3-201ENST00000311626 LTBP3Q9NS15 1303 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.25■■□□□ 1.79
HOXB3-201ENST00000311626 SLC26A2P50443 739 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 SLC8A3P57103 927 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 BSPRYQ5W0U4 402 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 C16orf46Q6P387 395 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 DENND5BQ6ZUT9 1274 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 NDUFAF2Q8N183 169 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 VPS52Q8N1B4 723 aa26.25■■□□□ 1.79
HOXB3-201ENST00000311626 CCDC185Q8N715 623 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms