RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 TRAF2Q12933 501 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 ZMYND11Q15326 602 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 GPAT2Q6NUI2 795 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 PACSIN1Q9BY11 444 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 MORC2Q9Y6X9 1032 aaPredicted RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 PAICSP22234 425 aaKnown RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 ACAP2Q15057 778 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 NDUFA5Q16718 116 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 SCARA3Q6AZY7 606 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 RDM1Q8NG50 284 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 LRRC4BQ9NT99 713 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 HPS5Q9UPZ3 1129 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 KANSL1LA0AUZ9 987 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 ADCY6O43306 1168 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 PDE5AO76074 875 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 SUPT20HL2P0C7V6 817 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 SERPINH1P50454 418 aaKnown RBP13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 NME5P56597 212 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 ZCWPW2Q504Y3 356 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 PLEKHA7Q6IQ23 1121 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 CHPFQ8IZ52 775 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 ATG16L2Q8NAA4 619 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 KAT2BQ92831 832 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 CST8O60676 142 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 IL6P05231 212 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 SERPINB8P50452 374 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 AAR2Q9Y312 384 aaKnown RBP13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 ZNF862O60290 1169 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 OR6B1O95007 311 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 PIK3R1P27986 724 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 HLFQ16534 295 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 TAF2Q6P1X5 1199 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 CAPSLQ8WWF8 208 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 RHBGQ9H310 441 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 PCDHGA3Q9Y5H0 932 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 H7C0S8 307 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 GNRH1P01148 92 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 VAV1P15498 845 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 CTCFP49711 727 aaPredicted RBP13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 CENPCQ03188 943 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 PLEKHF1Q96S99 279 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 CCT8L1PA6NM43 557 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 USP27XA6NNY8 438 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 FAM220BPB1ANY3 271 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 PDIA5Q14554 519 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 PPM1LQ5SGD2 360 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 ULK3Q6PHR2 472 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 MIB1Q86YT6 1006 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 KLF6Q99612 283 aaPredicted RBP13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 EFCAB1Q9HAE3 211 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 SH3BP4Q9P0V3 963 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 ALDH2P05091 517 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 EMC2Q15006 297 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 REEP2Q9BRK0 252 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 TMEM8AQ9HCN3 771 aa13.23□□□□□ -0.29
SPTBN2-201ENST00000309996 C19orf81C9J6K1 198 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 ACADLP28330 430 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 GTF2H1P32780 548 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 ZSWIM7Q19AV6 140 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 LLGL2Q6P1M3 1020 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 GPRASP2Q96D09 838 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 ATP7BP35670 1465 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 SAMD9Q5K651 1589 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 MAGEA13PA6NCF6 341 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 UCHL3P15374 230 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 ARF4P18085 180 aaPredicted RBP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 RSBN1Q5VWQ0 802 aaPredicted RBP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 PCSK9Q8NBP7 692 aaKnown RBP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 FEZF2Q8TBJ5 459 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 SH2D3AQ9BRG2 576 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 NR5A2O00482 541 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 ACADSP16219 412 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 EPHB2P29323 1055 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 RFC5P40937 340 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 CDC73Q6P1J9 531 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 PDP2Q9P2J9 529 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 ZFYVE16Q7Z3T8 1539 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 EXTL3O43909 919 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 KRT6AP02538 564 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 KRT6BP04259 564 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 KRT6CP48668 564 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 SETMARQ53H47 684 aaPredicted RBP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 CCDC54Q8NEL0 328 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 HASPINQ8TF76 798 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 SGF29Q96ES7 293 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 TEX13BQ9BXU2 312 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 PCDHB2Q9Y5E7 798 aa13.22□□□□□ -0.29
SPTBN2-201ENST00000309996 THRAP10827 490 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms