RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 TMEM121Q9BTD3 319 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 DDX23Q9BUQ8 820 aaKnown RBP11.58□□□□□ -0.56
TRIM59-201ENST00000309784 TMEM189-UBE2V1I3L0A0 370 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 DGKIO75912 1065 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 OAZ2O95190 189 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 GBP1P32455 592 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 CDKN2BP42772 138 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 YWHAGP61981 247 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRIM59-201ENST00000309784 FPGSQ05932 587 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 CASP8Q14790 479 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 CA9Q16790 459 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 TTC13Q8NBP0 860 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 CCNYQ8ND76 341 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 IGSF21Q96ID5 467 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 ZNF512Q96ME7 567 aaPredicted RBP11.58□□□□□ -0.56
TRIM59-201ENST00000309784 TMPRSS4Q9NRS4 437 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 EFCAB14O75071 495 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 KRT14P02533 472 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 RBP3P10745 1247 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 FNTAP49354 379 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 LMNB2Q03252 620 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRIM59-201ENST00000309784 NPNTQ6UXI9 565 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 TMC7Q7Z402 723 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 ZDHHC14Q8IZN3 488 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 NUP93Q8N1F7 819 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 PYROXD2Q8N2H3 581 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 FIBCD1Q8N539 461 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 AAASQ9NRG9 546 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 SEPT10Q9P0V9 454 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 SFMBT1Q9UHJ3 866 aa11.58□□□□□ -0.56
TRIM59-201ENST00000309784 TRIM66O15016 1216 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 PTPN9P43378 593 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 GSCP56915 257 aaPredicted RBP11.57□□□□□ -0.56
TRIM59-201ENST00000309784 CUL1Q13616 776 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 C1orf53Q5VUE5 145 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 RNF19BQ6ZMZ0 732 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 ANKS1BQ7Z6G8 1248 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 VPS52Q8N1B4 723 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 NETO2Q8NC67 525 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 FMO2Q99518 471 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 ZCWPW1Q9H0M4 648 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 SPG21Q9NZD8 308 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 ATP8A1Q9Y2Q0 1164 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 YWHAQP27348 245 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 IFFO1Q0D2I5 559 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 EFEMP1Q12805 493 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 PDK2Q15119 407 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 CCNG2Q16589 344 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 BEND6Q5SZJ8 279 aaPredicted RBP11.57□□□□□ -0.56
TRIM59-201ENST00000309784 FAM182AQ5T1J6 154 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 CFAP58Q5T655 872 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 VSTM1Q6UX27 236 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 UHMK1Q8TAS1 419 aaKnown RBP11.57□□□□□ -0.56
TRIM59-201ENST00000309784 MAGEB5Q9BZ81 275 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 INPPL1O15357 1258 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 MSI1O43347 362 aaKnown RBP11.57□□□□□ -0.56
TRIM59-201ENST00000309784 NEBLO76041 1014 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 SPATA31D3P0C874 917 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 LAG3P18627 525 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 GLUD2P49448 558 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 ARSEP51690 589 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 C10orf120Q5SQS8 335 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 SYCP2LQ5T4T6 812 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 SPATA31D4Q6ZUB0 917 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 SPPL2BQ8TCT7 592 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 TRIM62Q9BVG3 475 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 FBXO44Q9H4M3 255 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 IL23AQ9NPF7 189 aa11.57□□□□□ -0.56
TRIM59-201ENST00000309784 A0A1W2PQH9 124 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 EEF2KO00418 725 aaKnown RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 AMPD1P23109 780 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 TPI1P60174 286 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 DHX9Q08211 1270 aaKnown RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 GPS1Q13098 491 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 MTMR3Q13615 1198 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 STRADAQ7RTN6 431 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 BCL7CQ8WUZ0 217 aaPredicted RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.561e-20■□□□□ 10.4
TRIM59-201ENST00000309784 TKTL2Q9H0I9 626 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 PCDH18Q9HCL0 1135 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 SLC4A7Q9Y6M7 1214 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 MTMR11A4FU01 709 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 H3BRJ5 948 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 DPYSL4O14531 572 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 POLR3GO15318 223 aaPredicted RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 TLL1O43897 1013 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 GOT1P17174 413 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 BASP1P80723 227 aaKnown RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 CBX1P83916 185 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 EMBQ6PCB8 327 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 FUBP3Q96I24 572 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 PIGVQ9NUD9 493 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 ANAPC5Q9UJX4 755 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 FRMPD3Q5JV73 1810 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 F5H423 210 aaPredicted RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 MDM4O15151 490 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms