RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 YAF2Q8IY57 180 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 OLIG1Q8TAK6 271 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 BPIFB1Q8TDL5 484 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 CLEC4CQ8WTT0 213 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 UHRF1Q96T88 793 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 DCLK3Q9C098 648 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 RNF38Q9H0F5 515 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 SMOC2Q9H3U7 446 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 MRPL47Q9HD33 250 aaKnown RBP18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 LSM7Q9UK45 103 aaKnown RBP18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 ZNF510Q9Y2H8 683 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 PAXBP1Q9Y5B6 917 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 CPQQ9Y646 472 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 NUMBLQ9Y6R0 609 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 A0A087X0T9 212 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 E2F8A0AVK6 867 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 HEPACAM2A8MVW5 462 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 PRAMEF12O95522 483 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 PLEKP08567 350 aaPredicted RBP18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 FAM228BP0C875 321 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 KRT3P12035 628 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 MATKP42679 507 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 RING1Q06587 406 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 FCHO2Q0JRZ9 810 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 EFEMP1Q12805 493 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 USP4Q13107 963 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 TDGQ13569 410 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 ARHGAP29Q52LW3 1261 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 CCDC122Q5T0U0 273 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 PARM1Q6UWI2 310 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 SPC24Q8NBT2 197 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 FGF14Q92915 247 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 PLD4Q96BZ4 506 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 OTUB2Q96DC9 234 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 SLC22A12Q96S37 553 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 CYP2S1Q96SQ9 504 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 SELENOOQ9BVL4 669 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 TRMT61BQ9BVS5 477 aaKnown RBP18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 TBC1D14Q9P2M4 693 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 TJP2Q9UDY2 1190 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 SORCS3Q9UPU3 1222 aa18.7■□□□□ 0.58
SSSCA1-201ENST00000309328 SIGLEC16A6NMB1 481 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 F9P00740 461 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 SLC2A3P11169 496 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 PGFP49763 221 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 PFKPQ01813 784 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 ZNF77Q15935 545 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 DCAF6Q58WW2 860 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 NUGGCQ68CJ6 796 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 TANGO2Q6ICL3 276 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 HFE2Q6ZVN8 426 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 UNC45BQ8IWX7 931 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 UBALD2Q8IYN6 164 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 CCDC112Q8NEF3 446 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 SH3RF2Q8TEC5 729 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 NDRG1Q92597 394 aaKnown RBP18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 EDEM1Q92611 657 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 KLF16Q9BXK1 252 aaPredicted RBP18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 LCMT1Q9UIC8 334 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 RASAL2Q9UJF2 1139 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 TMEM59LQ9UK28 342 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 SH3BP1Q9Y3L3 701 aa18.69■□□□□ 0.58
SSSCA1-201ENST00000309328 TMCO5BA8MYB1 307 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 GOLGA8SH3BPF8 625 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 LEFTY2O00292 366 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 CHADO15335 359 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 LATS1O95835 1130 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 TBX18O95935 607 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 FYNP06241 537 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 HARS2P49590 506 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 MTF1Q14872 753 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 PDGFRLQ15198 375 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 SPA17Q15506 151 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 ACBD5Q5T8D3 534 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 PLEKHA7Q6IQ23 1121 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 DCUN1D2Q6PH85 259 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 VITQ6UXI7 678 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 MIB1Q86YT6 1006 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 DEFB106AQ8N104 65 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 TXLNBQ8N3L3 684 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 DQX1Q8TE96 717 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 IRF7Q92985 503 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 PGAP3Q96FM1 320 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 CHP1Q99653 195 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 BAG1Q99933 345 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 TRPV5Q9NQA5 729 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 TAS2R14Q9NYV8 317 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 INTUQ9ULD6 942 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 NENFQ9UMX5 172 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 TLR6Q9Y2C9 796 aa18.68■□□□□ 0.58
SSSCA1-201ENST00000309328 SRFP11831 508 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 RRM1P23921 792 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 SDC4P31431 198 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 VIPR2P41587 438 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 GFPT1Q06210 699 aaPredicted RBP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 TRIP4Q15650 581 aaPredicted RBP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 SLC25A52Q3SY17 297 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 POTEHQ6S545 545 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms