RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CD52P31358 61 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 MC3RP41968 323 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CORO7P57737 925 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 SP4Q02446 784 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 LRRC63Q05C16 580 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 PPFIA1Q13136 1202 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 PDIA5Q14554 519 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 SPA17Q15506 151 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 PAN2Q504Q3 1202 aaKnown RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 DNAJC21Q5F1R6 531 aaKnown RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 EMC10Q5UCC4 262 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 EMBQ6PCB8 327 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 KCNV1Q6PIU1 500 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 USP17L6PQ6QN14 398 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 LRRC31Q6UY01 552 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 BMP8AQ7Z5Y6 402 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 ZNF761Q86XN6 746 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 SPATS2Q86XZ4 545 aaKnown RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 GUF1Q8N442 669 aaKnown RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CSGALNACT2Q8N6G5 542 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 SMRP1Q8NCR6 262 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 AENQ8WTP8 325 aaKnown RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 TRAPPC12Q8WVT3 735 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 DNAJB3Q8WWF6 145 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 SYN2Q92777 582 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 APBB2Q92870 758 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 SECISBP2LQ93073 1101 aaKnown RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CCDC42Q96M95 316 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 ALS2CR12Q96Q35 445 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 MMS19Q96T76 1030 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 TRIM9Q9C026 710 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 ZMYND12Q9H0C1 365 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 LMAN2LQ9H0V9 348 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 KCNH6Q9H252 994 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 FAM204AQ9H8W3 233 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 NHEJ1Q9H9Q4 299 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 C6orf50Q9HD87 102 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 RIC8AQ9NPQ8 531 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 FAM86C1Q9NVL1 165 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 MAP3K20Q9NYL2 800 aaKnown RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CD207Q9UJ71 328 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CDH22Q9UJ99 828 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 BARX2Q9UMQ3 279 aaPredicted RBP5.26□□□□□ -1.57
CKS1B-201ENST00000308987 SNX12Q9UMY4 172 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 PCDHA6Q9UN73 950 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 GDAQ9Y2T3 454 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 HYOU1Q9Y4L1 999 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 PCDHA8Q9Y5H6 950 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CDY2AQ9Y6F7 541 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 CHD8Q9HCK8 2581 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 ZFHX4Q86UP3 3567 aa5.26□□□□□ -1.57
CKS1B-201ENST00000308987 ATP8B3O60423 1300 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 ATXN2Q99700 1313 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 A0A087WUV0 522 aaPredicted RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 A0A0U1RQJ8 604 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 CES2O00748 559 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 ZNF205O95201 554 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 SYF2O95926 243 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 ATP1A1P05023 1023 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 DBHP09172 617 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 OR52Z1P0C646 297 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 IDEP14735 1019 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 VAV1P15498 845 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 TRIM21P19474 475 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 ANXA13P27216 316 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 MARK3P27448 753 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 CDC25AP30304 524 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 TCF7P36402 384 aaPredicted RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 EIF4A3P38919 411 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 MTIF2P46199 727 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 NRIP1P48552 1158 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 PRR5P85299 388 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 COASYQ13057 564 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 KCNC3Q14003 757 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 BTG3Q14201 252 aaPredicted RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 NONOQ15233 471 aaKnown RBP eCLIP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 MAN2A1Q16706 1144 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 MIIPQ5JXC2 388 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 NCAPH2Q6IBW4 605 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 FBXL19Q6PCT2 694 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 UNC13DQ70J99 1090 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 RBM23Q86U06 439 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 CABP7Q86V35 215 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 EFCAB13Q8IY85 973 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 MREGQ8N565 214 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 EFHBQ8N7U6 833 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 FAM76AQ8TAV0 307 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 ATP8B4Q8TF62 1192 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 POF1BQ8WVV4 589 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 ATRIPQ8WXE1 791 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 SUSD6Q92537 303 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 STAMQ92783 540 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 CAVIN3Q969G5 261 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 CALML4Q96GE6 196 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 CNOT6LQ96LI5 555 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 NAP1L4Q99733 375 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 SH3GL2Q99962 352 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 SENP7Q9BQF6 1050 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 C11orf84Q9BUA3 381 aaPredicted RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 RAB34Q9BZG1 259 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms